Salvelinus namaycush (lake trout): 120033259
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Entry
120033259 CDS
T07522
Name
(RefSeq) obscurin-like protein 1
KO
K19574
obscurin-like protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120033259
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
3M complex
120033259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Izumo-Ig
C2-set_2
Ig_6
Ig_4
C1-set
VEGFR-1-like_Ig-like
fn3
Motif
Other DBs
NCBI-GeneID:
120033259
NCBI-ProteinID:
XP_038835461
UniProt:
A0A8U0Q3H4
LinkDB
All DBs
Position
Sna40:complement(15560635..15577510)
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AA seq
2023 aa
AA seq
DB search
MDIFGGAPRVLGYSRPVVAQCGTDAVLQCKIGGNPRPEVVWEKKNVQIPSEGRYRLSEEG
KAYFLHITGVRLEDAGQYICKASNSVGETCAPATLKVEGNSQERQGAQKQTEVNRNGEVE
QRNGEVDQQSGEVEEKGEGSEREKKKQRYEGSDDRPHFLIKPLSLRVDRGEDAAFSCKLS
GNPLPQVVWEKDGKKLSDIFESAHFNVSSQDGGWFQLKIFRTRMPDGGVYTCRAHNNQGG
ALAGAVLLVELVPERQESGASTSNGCSNGQTSPRSIRHRMGRHGSSRQPDEPNLNSSNVK
KFAVSEGKHAKFRCFVTGKPKPEIIWKKDGAPLEAGRRHLLFEDREGYYTLKVMYCKHQD
TGLYVCAASNALGHTLSSVYLTVKAPAVRFRRSLQDVEVKERGMAVLECEVPNEGIPTAW
YLEDQRLQPGGKYGIEQKGTRRRLTIRDVGADDDGVYLCEMPDGGKSIAELAVKGTIVKK
LPRKLDVLEGENAVFCVEVEEENMDVHWFKDGLKLRESHQTILKSFGKTHILVFVSVCHG
DTGVVTFVVGRSKTSSRLRVKAARHSPPICPVGVEMDVDRPNSVLLSWEPAPTSQTTTRS
VYVLERQEVGSQEWLRCATSDTATSAEVMGDSVPCEGDYRFRVCCINKYGRSGHVEFPKV
VHLVPGPKIRTPLRGCEVTEGEDALFSIDLSVMVTGIWFLNSTQLQDTQHYSIQQANTQH
SLVIHSTKVEDHEAEVTFIANGVRDSAVLKVQAAVVKFSLMSESDSNKRVETGNPVVLYC
EVSHPSARVAWFKDGVGLQVTDGLNIQSEGNMRRIVIQSAEFSDSGVYTCETMGDVIKFN
VEVEGPPVQFSGVPEEELQKSAMELDPVVLTCEVSREDANATWYKDGVEVQASNNITIQT
EGTMRRLIIRCAETSDAGTYSCQSGDNSLSFTVNIKEPPVMIVEPKEDVVMEGHISEQVV
LQCELSRSSGEVHWFKDGLQVLETENVQLTSEGPYRRLTVLCCSAEDSGEYVCDTDGDSV
FFQVTITELPVRIVSPTESELELTSLTSERLELSCEISQPDAQVRWYRDGLEVEESASLI
LEVQGAHRTLVIPTTTVEDTGEYVCDTEDDSVTWLVTITEPPVKLARSETMSDVMDCFSG
DPIVLEIEVSRFNAEVIWMKDGGEVEESSDVTITEDGLIRRLTIRTPSPGDSGKYTCLAS
DDLIDFQVKVSEPPVKIVNRSEVKTEVKSLPSNDIELECELSRANAVAKWYKDGRRLNED
ERFCEEEEGAFRSLVILNAELEDCGDYFLDAGDDNITFHVTVQEPPVTILGNSEDADYQE
MVAGDDLILACEVSRANAPVQWYCNDRQLTSDDRTYIESYGTLRKLILSDILPSDSGKYM
CDAIDDKMVTMVKIQVPRVVEFLTELHNTMVLEGEDATFKCVVSPEDVQLVWGMDGELVV
MGARFQATQNGLCHTMVIKSCQVLDSSKITVEAEGNVSKATLKVQEAQVTFTKKMEAVMA
EEYGDATMETEVSLDTGEVQWMRQGVVIQPGPRHTLGQSGLKRSLTICNLNLSDRGTYRC
ETLHDRTQVKLNVEPRKIAIRKGLAETDTFERETASFEVELSHTGVEGVWQKDGIRVKPS
NHWRVSCNGLVHGLTLSNLTLEDTGTIVFSAEGVRTSARLTVKETPVTIMKKLIDMRLEQ
GSPATLECELSRQNVEVRWLKNGTELKPGKTQYRIYSMGRKRFCQLLQCSLSDAGTYTCD
VGDVNTSCNLEVYEPELEVLHGLEDLYVQEDQNAVFMCEVSMEDVTGEWYKDGHKIRPTS
TIKIRTEGTKHFLLMCSVKAEDSGEIRFVTKQTESTAYLEVEEAPVSIVKPLRDRTALEK
HRVILDCTVSTPRCELTWYRGKAELVSSDRLEIHSDGCYHKLTIHEATVEDEGTYSIEVG
EHTSTAQLLVEAQSLVIETELEDVAVTAPDQACFQCEVSVAISRPPVWTLNGETIQSSPD
VRLENHRTVHKLNLKQTRPDMSGMVTFAMGKAKSSAKLNVMWK
NT seq
6072 nt
NT seq
+upstream
nt +downstream
nt
atggacatattcggtggtgccccccgtgtactgggctactcgcgccccgtggtggcacag
tgtggcacggacgccgtcctgcaatgcaagatcggcggcaaccctcgtcctgaggtggtc
tgggagaagaagaatgtacagatcccatcagagggacgctacaggctgtcggaggagggc
aaggcctacttcctacacatcactggggtcaggctggaggacgcaggccagtatatctgc
aaggccagtaacagcgtgggtgagacgtgcgcccctgccacactgaaggtggaggggaac
agtcaggagcggcaaggggcacagaaacagacagaggtcaataggaatggagaggtagag
cagaggaatggagaggtagaccaacagagcggagaggtagaggaaaagggagaggggagt
gagcgggagaaaaagaagcagcgctatgaagggtcagacgacagacctcacttcctcatc
aagcccctctccttgagggtggaccggggcgaggacgcagccttctcctgtaagctgtcg
ggcaaccctctgccccaggtggtgtgggagaaggacgggaagaagctgagcgacatcttc
gagagcgcccacttcaacgtcagcagccaggacggaggctggttccagctgaagatcttc
cggacgcggatgcccgacgggggtgtctatacctgcagagctcataacaatcaaggaggg
gcgctggcgggcgcagtgctgcttgtggagctcgtcccggaacggcaggagagcggggcg
tccacgtcaaatgggtgcagcaacgggcagacatcacctcgtagtataaggcacaggatg
gggagacacggttcgtccagacagccggacgagcccaatctgaactcgtccaatgtgaag
aaatttgcggtttcggaggggaaacatgctaagttccgctgcttcgtgacagggaaacct
aagcctgagatcatctggaagaaagacggagcgcccctagaggctgggaggcgtcacctt
ctgtttgaggacagagagggttactacacgctcaaagtgatgtactgtaaacatcaggac
acagggctgtacgtgtgtgctgcgtccaacgctctgggacacaccctcagctctgtttac
ctgacggtcaaagctccagcggtgcggttcaggcggtcactgcaagacgtggaggtgaaa
gagagaggcatggccgtgttggagtgtgaggtacctaatgagggcatccctactgcctgg
tacctggaggaccagagactgcagccaggaggtaaatacggcatagagcagaaaggaacc
aggcgcaggctcactatccgagatgtaggagcagacgacgatggggtctatctctgtgag
atgcctgatggagggaagagtatcgctgagctggccgtcaaaggcacaattgttaaaaaa
cttcctcgaaaactagacgtgttggagggggagaacgcagtgttctgtgtggaggtagag
gaggagaacatggatgtccactggttcaaagatggcctgaagctacgcgagagccaccag
actatcctcaagtcctttggtaaaacccacatcctggtgttcgtcagcgtctgccatggg
gacactggggtcgtgaccttcgttgtgggaagatccaagacctcatcccggctcagagtc
aaagctgccagacacagccctcccatctgtccagtgggggtggagatggatgtggacagg
cccaacagcgtgctcctctcctgggagccggcccccaccagccagaccaccacgcgctcc
gtctatgtcctggagagacaggaagtgggatcacaggagtggctgaggtgtgcgacctcc
gacacggcgacctccgcagaggtcatgggcgacagcgtgccgtgcgagggcgattaccgc
ttccgcgtctgctgcatcaataagtatggtcgtagtggacacgtggagttccctaaagtc
gtccatcttgtgccaggtcccaagataaggacccctctccggggctgtgaggtgacggag
ggggaggacgccctgttctccatcgatctgtcagtgatggtgacgggcatctggttcctg
aacagcacccagctacaggatacccaacactactctatccaacaggccaatacacagcac
tccctggtaatccacagcaccaaggtggaagaccacgaggcagaggtcaccttcatcgcc
aacggagtcagagactcagcagttctcaaggttcaagctgcggtggtgaagttcagccta
atgtcagagtcagacagtaacaagagggtggagactggtaaccctgtggtcctgtactgt
gaggtgtcccacccctcagccagggtggcctggttcaaggatggggtggggctacaggtg
acagacggcctcaacatccaatcagaaggcaacatgagaaggatcgttatccaatcggct
gagttcagcgactctggcgtgtacacatgcgagacgatgggtgatgtcatcaaattcaac
gtggaggttgaaggtccccctgtgcagttcagtggggtccctgaggaggagctccagaag
tctgccatggagctggatcctgtggtgctcacctgtgaggtttccagagaggacgccaac
gctacctggtataaggatggggttgaggtccaggccagtaataacatcaccatacaaaca
gagggcaccatgaggagactgatcatccgttgtgctgagacctcagacgcaggaacctac
agctgtcaatcaggagacaacagcctctcattcactgtcaacatcaaagagcctccagtg
atgatcgtggagcccaaggaggacgtggttatggagggtcatatctctgagcaggtggtg
ctgcagtgtgagctgtcccgctccagcggtgaggtccactggtttaaggacggccttcag
gtcctggagacggagaacgtccagctgacgtccgagggaccgtacaggaggctgaccgtc
ctctgctgctcggcagaagattccggagagtacgtctgcgacacggatggagactctgtg
ttcttccaggtcaccatcacagagcttccggtgcgaatcgtctcccccactgagtctgag
ctggagctgaccagcctgacctctgagaggctggagctcagctgtgagatctcccagcct
gatgcccaggtacggtggtaccgagacgggctggaggtggaggagagtgcctctctcatc
ctggaggtccagggagcccacaggacactggtcatccccacgaccactgtggaggacaca
ggagagtatgtgtgtgacacagaggatgactcggtcacatggctggtcactattacagag
cctcctgtgaagctggcccgctctgaaacaatgtctgacgtaatggactgtttctctgga
gaccccatcgtcctggagatcgaggtgtcacggttcaacgctgaggtgatctggatgaag
gatggaggagaggtggaggagagcagtgatgtcaccatcactgaggatggactcatccgc
cgcctcaccatccgcacgccctccccgggggactctgggaaatacacctgtcttgcctca
gatgacctcatcgacttccaggtcaaggtgtcagagcccccagtgaagattgtgaatagg
tcagaagtcaagacagaggtcaagtccctgccctctaatgacatcgagttggagtgtgaa
ctctccagggccaatgccgtcgctaagtggtacaaagatggccgccggttaaacgaggac
gagaggttctgtgaggaggaagaaggggcgttccgctccctggtgatccttaacgctgag
ctggaagattgcggagactacttccttgatgctggagatgacaacatcaccttccatgtc
actgtgcaagagcctccagtgaccatcctggggaactctgaggacgcagactaccaggag
atggttgccggggacgacctgatcctggcctgtgaggtgtcccgggccaatgcccctgtc
cagtggtactgtaacgacagacagctgactagcgatgaccggacctacatcgagagctac
ggcacgctgaggaaactcatcctctctgacatcctgccctccgactctgggaagtacatg
tgtgatgctatcgatgacaagatggtcaccatggtgaagatccaagtgccccgcgtggta
gagttcttgacagagctccacaacaccatggtgttagagggagaggacgccaccttcaag
tgcgtggtgtcgccagaggacgtgcagctggtgtgggggatggacggcgagctcgtcgtc
atgggtgcccgtttccaggcgacgcagaacggcctgtgtcacaccatggtgatcaagagc
tgtcaggtcctggactcctctaagatcacagtggaggctgaggggaacgtgtccaaggcc
accctcaaagtacaggaagctcaggtgaccttcactaagaagatggaggcggtgatggcc
gaggagtacggagacgctaccatggaaacagaggtcagtctggacacgggcgaggtccag
tggatgaggcagggtgtggtcatccagccaggaccccgacacaccctgggccagagcgga
ctcaaacgcagcctgaccatctgcaacctcaacctctctgaccgcggaacctaccgctgt
gaaaccctacacgaccgcacgcaggtcaaactcaacgtggagccccgtaagatcgccatc
cgtaagggtctggcggagacggacacgtttgagcgggagacggcctccttcgaggtggag
ctgtctcacactggcgtggagggcgtctggcagaaggacggcatccgggtcaaacccagc
aaccactggcgggtgagctgcaacgggctggtccacggcctcaccctgtccaaccttacc
ctggaggacacgggcaccatcgtcttctctgcggagggagtccggacctctgccaggctc
actgtcaaggagactccagtgactatcatgaagaagctgatagacatgagactggagcag
ggctctcctgccacattggagtgtgagctgtccagacagaacgtggaggtcaggtggctg
aagaatgggacagagctgaagccagggaagacccagtaccgtatttactccatggggagg
aagaggttctgtcagctgctgcagtgtagcctctctgatgcaggcacctacacctgtgac
gtaggagacgtcaatacatcctgtaacctggaggtctatgagcctgaactggaggtgcta
catgggctggaggacctgtatgtccaggaggaccagaatgctgtgttcatgtgtgaggtg
tccatggaggacgtgaccggggagtggtacaaggatggacacaagatacgacccactagc
accatcaagatacgcacagaggggaccaaacacttccttctcatgtgcagcgttaaagct
gaggattctggggagatccgctttgtgaccaaacagacagaatcaacagcctacctagag
gtggaagaggcccccgtgtctatcgtgaagcctctgagagaccgcacggctctggagaag
caccgcgtgattctggactgcaccgtgtccacgccgcgctgtgaactcacatggtacaga
ggcaaggcagagctggtgtcttctgataggctagagatccacagtgacggctgctaccat
aaattgaccatccacgaggcaactgtagaggatgagggtacctatagtatagaggttggg
gagcacacctccacagcccaactcctggtggaagcccagtccctggtgatagagacagag
ctggaggatgtggcggtgacagctcctgaccaggcctgtttccagtgtgaggtgtccgtg
gccatcagcaggcccccagtctggactctgaacggagagaccatccagtccagccctgat
gtccgcttagagaaccacagaaccgtccacaaactgaacctgaaacagaccagaccagac
atgagcgggatggttaccttcgccatgggaaaggccaagagcagcgccaaactgaacgtg
atgtggaagtag
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