Salvelinus namaycush (lake trout): 120033389
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Entry
120033389 CDS
T07522
Name
(RefSeq) signal transducer and activator of transcription 1-alpha/beta-like isoform X1
KO
K11220
signal transducer and activator of transcription 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04217
Necroptosis
snh04620
Toll-like receptor signaling pathway
snh04621
NOD-like receptor signaling pathway
snh04625
C-type lectin receptor signaling pathway
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120033389
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120033389
04621 NOD-like receptor signaling pathway
120033389
04625 C-type lectin receptor signaling pathway
120033389
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120033389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120033389
Transcription factors [BR:
snh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
STAT
120033389
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Ortholog
Paralog
GFIT
Motif
Pfam:
STAT_alpha
STAT_bind
STAT_int
STAT_linker
STAT1_TAZ2bind
SH2
SecM
Med9
Motif
Other DBs
NCBI-GeneID:
120033389
NCBI-ProteinID:
XP_038835647
UniProt:
A0A8U0Q2V5
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All DBs
Position
40:6596008..6626731
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AA seq
798 aa
AA seq
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MAQWCQLQLLESKYLEQVDQIYDDSFPMDIRQYLSKWIESIDWDNVAVQDSLATVRFHDL
LAQLDDQHSRFALENNFLLQHNIRKIKRNLQDRFQEDPVHMAMIISRNLKEEQRILAAAK
SIETDRENTQTSMVLEKQKLDNKVKDMKNKVQEADQNVKSLEYLQDEHDFKENTLKNREH
EMNGLTPKQLEHEKLLIVEMCFKLKFKRVEVVGQLAEVLNMAEAVQSDLISEELPEWKKR
QQSSCIGGPPNACLDQLQNWFTAVAESLQQVRQQLKELQELEQKYTYDNDPIKQQKGFLE
GRALALFRNLLEHSLVVERQPCMPTHPQRTLVLKTQVQFTVKLRFLVKLPEFNYQLKVKA
LFDKDVTEKKGFRKFNILGTNTKVMNMEESNGSLAAEFRHLQLKEQKVAGNRTNEGPLIV
TEELHCICFESELNQSGLELKLETISLPIVVISNVSQLPSGWASILWYNMLTSEPKNLKF
FLSPPVASWGQLSEVLSWQFSSVTKRGLNEEQLGMLADKLLGQKAQRNPEGLIPWTKFCK
SLSEKSFPFWLWIEAILDLIKRHLLSLWNDGCILGFVSKEREKAMLTGKCPGTFLLRFSE
SSRDGAITFTWVEHDLYDKPVFHAVEPYTKKKLSAVSLPDIIRTYKVMAAENIPENPLRF
LYPDIPKDKSFGKYYTRASEASEPMDVEGSSVTGYMKTELISVSEVHPSRLQDNMMPMSP
DVFGELKRTVAPVLQCWSSPKDIDAVASDLREFLPEDFQVLSMVPLSPNKHVFASNNRLW
VTFQFCKIITAAGKPYLL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtggtgccagctgcaactactggagtctaaatacctggagcaggtcgaccag
atctatgatgactccttccccatggacatcagacagtacctcagcaagtggattgagagc
atcgattgggataatgtggctgttcaggactccttagcaacagtacgtttccatgacctc
ctagcccagctggatgaccaacacagccgcttcgccctggaaaacaacttcctgctacaa
cacaacatccgcaagatcaagagaaacctccaggaccgctttcaggaggaccccgttcac
atggccatgatcatctccagaaacctgaaggaggagcagaggattctggctgctgccaaa
agcatagagaccgacagagaaaacacacagaccagcatggttctggagaagcaaaagctg
gacaacaaagtgaaagacatgaaaaacaaggttcaggaagcggatcagaatgtaaagtct
ctggaataccttcaagacgagcatgactttaaggaaaatactcttaagaacagagaacat
gaaatgaacgggctgacacccaaacagctggaacacgagaagctgctgattgtagagatg
tgtttcaagctgaagttcaagagagtggaagtggttggccagttggcggaggtgctcaac
atggccgaggcggtccagtcagacctgatctcagaggagctgcctgagtggaagaagagg
cagcagagctcctgtattggaggaccacccaacgcatgtctggaccaactgcagaactgg
ttcacagcggtggcagaaagcctgcagcaggtgaggcagcagctgaaggagctccaggaa
ctagagcagaagtacacatacgacaacgacccaatcaaacagcagaaaggcttcctggag
gggcgggccctggcactgttccggaacctccttgaacattccttggtggtagagagacag
ccctgtatgcccacacatccacagagaactctggtgctgaagacacaggtgcagttcact
gtcaagctcagatttcttgtgaagctcccggaattcaactatcaactcaaagtgaaagct
ttgtttgacaaggacgttacagaaaagaaagggtttcgtaagttcaacatattgggtacc
aacacaaaagttatgaatatggaggagtcaaatggaagcttggctgcagagtttcgccat
ttgcaactgaaagagcagaaagtagctggcaacagaacaaatgaggggcctctcattgtg
acagaggagctgcactgcatctgctttgagtctgaactcaaccagtcaggtctggagctc
aagctagagaccatctccctgcccatcgtggtcatctccaacgtcagccagctgcccagt
ggctgggcctccatcctgtggtacaacatgctgaccagcgagcccaagaacctgaagttc
ttcctgagccctcctgtagcgtcctggggtcagctgtctgaggtgctgagctggcagttc
tcctctgtcaccaagagggggctcaatgaagagcagctaggcatgctggctgacaaacta
ctgggccagaaagcacagcggaatcctgagggccttatcccctggactaagttctgtaag
agtctcagtgagaagagctttcccttctggctgtggatcgaagctatcctggacctcatc
aagagacatctgctgtccctatggaacgatggttgcatcctgggctttgtgagtaaggag
agggagaaggccatgctgactgggaagtgtccaggcacgttcctgctgcgcttcagtgag
agtagcagagacggagccatcacattcacttgggtggaacacgacctatacgataagcct
gtattccatgcagtggagccctacaccaagaagaagctgtctgccgtctctctgcctgac
atcatccgaacctacaaggtgatggcagctgagaacatcccagagaacccactccgcttc
ctctacccagacatccccaaagacaagtccttcggaaagtactacaccagggcctccgag
gcatcggagcccatggatgtggagggttccagcgtcacaggatacatgaagacagaactc
atatcagtgtcagaagttcacccatctagactgcaagacaacatgatgcccatgtcgcca
gacgtgttcggagagctgaagaggactgttgcaccagtgctccagtgctggagtagtcct
aaggacattgacgctgtggcgtctgatctcagagagtttttacctgaagactttcaggta
ttgtcaatggtgcccctttctccgaataagcatgtctttgctagtaataacaggctgtgg
gtgacgtttcaattttgcaaaataatcaccgctgctggcaaaccgtacctactgtag
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