Salvelinus namaycush (lake trout): 120033401
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Entry
120033401 CDS
T07522
Name
(RefSeq) claudin-10-like
KO
K06087
claudin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03272
Virion - Hepatitis viruses
snh04382
Cornified envelope formation
snh04514
Cell adhesion molecule (CAM) interaction
snh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
120033401
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120033401
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120033401
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120033401
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120033401
04147 Exosome [BR:
snh04147
]
120033401
Cilium and associated proteins [BR:
snh03037
]
Other cilia and associated proteins
Stereociliary proteins
120033401
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
120033401
Exosomal proteins of colorectal cancer cells
120033401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
120033401
NCBI-ProteinID:
XP_038835672
UniProt:
A0A8U0Q485
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All DBs
Position
40:complement(12188219..12189976)
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AA seq
328 aa
AA seq
DB search
MKIRVMQIWGFLMTVLGWIFVACTMAMEGWKITSIGGMGGSAVIKVAWYWSNLWKACFTD
STSVTNCQDFPVLWSVDNHIQIVRGLLMGALSVGMLGFVLSLIGMECTFLGGKDKAKHRK
LFTGGVCHIISGFLAASGYAVYAKYVSGEYFNPYFDGLKFDLGTPLFLGWVGSAFHMTGG
WFYLASVCKLLCEDESKTLVIPELPEVESDQAKSTTVQSPVSQITSKIKVSSASKISSKS
ARSDVSAISSRSGQSGRASNSERSGRSSNSGQSSKFGGGSLTSGRPSRSRSHGSVHSEVS
SGSSSTVSSLSSGSRRSEREPFIKNSYL
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatccgcgtgatgcagatctggggcttcctgatgacagtgctgggctggatcttt
gtggcatgcaccatggccatggagggctggaagatcacgtccatcgggggcatgggcggc
tcggctgtcatcaaggtggcctggtactggtctaacctgtggaaggcctgcttcaccgac
tccacttctgtcaccaactgccaagacttccctgtgctctggtccgtggacaaccacatc
cagattgtgaggggcctgctgatgggtgctctgtctgtggggatgctggggttcgtactc
agtctcattgggatggagtgcaccttcctcgggggcaaggacaaggcaaagcacaggaag
ctcttcactggaggagtctgtcacatcatcagtggctttctggctgcgtcaggatatgct
gtctacgcaaaatacgtctccggggaatacttcaacccctattttgacggattaaagttt
gacctggggactcctctgtttcttggctgggtgggatcagctttccatatgacagggggt
tggttctacttggcctctgtgtgcaaactgctctgtgaggacgagagcaaaactctagtc
atccctgaacttcccgaggttgagagcgaccaggccaagtccaccacagtacagtcccca
gtatcccagatcacctcaaagatcaaggtttcatctgcatctaagatttcttcaaaatct
gcacgctcagatgtgtctgccatctcctcaaggtctggtcagtccggtcgcgcgtccaat
tcagagcggtctggacggtcctcgaactccgggcagtcctcgaaatttggcggtgggtct
ttgacgtctggtcgtccatcgaggtcgaggtctcatgggtcagtgcactctgaggtgagc
agtggcagcagtagtacagtgtcctctttatccagtgggtcaagaaggagcgagagagaa
ccgtttatcaaaaactcctacttatga
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