Salvelinus namaycush (lake trout): 120033415
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Entry
120033415 CDS
T07522
Name
(RefSeq) trafficking protein particle complex subunit 10-like
KO
K20307
trafficking protein particle complex subunit 10
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120033415
Membrane trafficking [BR:
snh04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
120033415
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Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
SNAP
TPR_7
Motif
Other DBs
NCBI-GeneID:
120033415
NCBI-ProteinID:
XP_038835697
UniProt:
A0A8U0Q2M2
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Position
Sna40:complement(4871084..4888075)
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AA seq
1272 aa
AA seq
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MEAHEEKPIIYTMENKPIVTCAGDQSLFTSLYTSLAQQLPREPMEWRRSYGRAPKMIHLE
ANFVQFKEELLPKDGNRALLTFPFLHIYWTDCCDTEMYKASVKDDMLRWQSTLRLHGSVD
WLIVVVESEAKKKNKTNILPRTSIVDKIRNDFCNKQSDRCVVLSDPLKESSRSQDSWSSF
LTKLRTLLLMSFTKNLGRFEDDMRTLREKRTEPGWSFCDYFMVQEELAFVFEMLQQFEDA
LVQYDELDALFTQYVLNFGAGDGANWLGSFCAPVKRWSGLLLRRPIDMEKRELIQRGEAS
LLDLRSYLFSRQCTLLIFLQRPWEVTQRALELLHNCVQELRLLEVYVVQGALDCWVFLSC
LEVLHRIEGCCDRAQLEANCSHTVGLWTYATEKLKSLGYLCGLVAEKVPTSEDLNRTVDL
LAGLGEERPETVNSLQSPYKKLNEALSSVEAFEKHYLELSHAAMEMYRAIGRMRSARLIG
KSLAEFYMKKGDPERAEGFLDDSLRSYVAEGWSLQVTHTRKQMAECQKLLQQTEDYLQTS
ALLAGDANLTEEERKHFCQEILTFASQPPAPSDQTVALSMAAFAQLRQMQFSPPGAVVHV
GAALQLELRIRCLMPVAVQVEQLAATLHFSLEQGGARGRAGSAQRRTGHGPQGQGDGVVL
FPQGSPGAGMGASLPPALELYEMQDRSPSDSSLNSTGVVCKNMHLLLRRHDSSASLDTPT
AGALPAAVAVDDGAQMLRARDITLQPGDNSILFTAPTGEPGSYTLRQLCGSVGRVQFVQS
HIYPVVQYEVYSQEPQLTIEPLSDNLLAGIPQKVKFTIATGHYSVKKGDALQLSNTDSMP
ILHSSCCSATVLSSTGERMGESALSIQSSEKVTSISLPPTPPYHTLEFQLEVLCHIPPTP
LKPDIERLTNGEVRHRPKSHSHADSGMINIDQKVSIDCPWSIYSTLIALTFYVPFKAKHS
ILSAGKRKYIQVCLQNVSDTNFQLADPVLTERQPTVSMELLSLNVKTQQPVCSQQSVFCL
WEMRWAKPLPLCLQCAFSASFAPVSASDAHTAFKPYCYEFQLDRVSTLYSLKAEILPPSG
DQHCRTGALCGLEVSITRQAEPSETEGEEEESTEIEGLRTTKLMYEVVDNSSNWAVCGKS
SGVVSMPVAASATHKVQMEVMPLFAGHLPFPNIKVFKYLPHNAVPAIQPDTDSCLENDTI
SLLDKGLDDQGDTASIRSRGSVHSVGSGEQQRGLPMPRLEPFTPGQVFYWSQGRQVLVLP
VTDDHVMEVNVT
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggaggcccatgaagaaaagccaataatctacactatggaaaacaagccgattgtgaca
tgtgctggcgaccagagcctgttcacttctctctacacctctctggcacagcagttaccc
agggagcccatggagtggaggaggtcctacggacgcgcaccaaagatgattcacctcgag
gccaactttgttcagttcaaagaggagctacttcctaaggatggaaacagagccctgctc
acctttcccttcctgcatatatactggacagactgttgtgacaccgagatgtacaaggcg
tcggtgaaggatgacatgctgcggtggcagagcaccctgcggctgcacggctcggtggac
tggctcatcgtggtggtggagagcgaagccaagaagaagaacaagaccaacatcctgccg
cgcacctccatcgtagacaagatccgcaacgacttctgcaacaagcagagcgacaggtgt
gtggttttgtcggaccctctgaaggagtcgtctcggtcccaggattcgtggagctccttc
ctgaccaagctgcgcaccttgctgctcatgtccttcaccaagaacctgggccgcttcgag
gacgacatgcgcacgctccgcgagaaacgcaccgagcccggctggagcttctgcgactac
ttcatggtgcaggaggagttggcctttgtgtttgagatgctgcagcagtttgaggatgcc
ctggtccagtacgacgagctggacgctctcttcactcagtatgtcctcaactttggggct
ggagacggggccaactggctgggctcgttctgtgccccggtgaagcgctggagcgggctg
ctcctgcggcggcccatcgacatggagaagcgcgagctgatccagcgcggcgaagccagc
ctgctggacctgcgcagctacttgttctcccgccagtgtaccctgctcatcttcctccag
aggccctgggaggtcacccagcgagccctggagctgctgcacaattgtgtccaggagctg
cgcctgctcgaggtgtatgtggtccagggggcgttggactgctgggtgttcctcagctgt
ctggaagtgctccacaggatcgagggctgctgcgaccgtgcccagctagaggccaactgc
tcccacactgtcggcctgtggacctacgccacagagaagctaaagtctctgggatacctg
tgtggcctggtggctgagaaggtccccacctccgaggacctaaaccgcaccgtggacctt
ctggctggcctgggggaagagagaccagagacggtcaacagcctgcagagcccttacaaa
aaactcaatgaggccttatcgtctgtggaggcgtttgaaaaacactatctggagctgtct
catgctgctatggagatgtacagagccataggcaggatgcgctcagcccggctcattggg
aagagtctagctgagttttacatgaagaaaggtgacccggaacgagcagagggcttcctt
gatgactctctgaggtcctacgtggcagaggggtggagcctgcaggtgactcataccagg
aagcagatggccgagtgtcagaagctcctgcagcagactgaagactacctgcagaccagt
gccttgctagcgggcgatgccaacctgacagaggaggagaggaagcacttctgccaggag
atccttaccttcgccagccagcccccggcaccctcagaccagactgtggctctgagcatg
gcggcattcgcccagctgcgccagatgcagttcagcccgcctggcgccgtggtgcacgtg
ggtgccgccctgcagctggagctgcgtatacgctgcctgatgcctgtggctgtgcaggtg
gagcagctggctgccactctccacttcagcctggagcagggcggggcgaggggccgtgcg
ggcagcgcccagaggaggactggccatggaccacaaggccagggggacggggtggtcctg
ttcccccagggaagccccggagccgggatgggcgcttcgctaccccccgccctggagctt
tacgaaatgcaggaccgcagcccgtcggacagctcgctcaactccacgggagtggtgtgt
aagaacatgcacctgctgctgcggcgccacgacagctcagcctccctagacacgcccacc
gccggggccctcccggcagcggtcgccgtggatgacggggcccagatgttgagggcacgc
gacataacgctgcagcccggcgacaacagcatcttgttcacggccccgactggagagccg
ggctcgtacacgttacgtcagctgtgcgggagcgtggggagagtccagtttgtccagtct
cacatctaccctgtggtgcagtacgaggtctactcccaggagcctcagctcaccatcgag
cccctctcagacaacctgttggcaggcattccccagaaggtgaagttcaccatagcaaca
ggccactacagtgtgaagaagggtgacgcgttgcagcttagcaatacagactccatgccc
atcctccactctagctgctgctctgctaccgtcctgtccagcacgggagagcgcatgggg
gagagtgctctttccatccagtcatcggagaaggtgaccagcatctccctgccccccacc
cctccctaccacaccctggagttccagctggaggtgctgtgccacatcccccccacgccc
ctcaagcccgacatcgagcgtctcaccaacggcgaggtccgccaccggcccaagagccac
agccacgcagacagtggcatgatcaacatcgaccaaaaggtctccatcgactgtccttgg
tccatctactccactctcatagccctaaccttctatgtccctttcaaagccaagcactca
atactctctgctgggaaaaggaagtacatacaggtgtgtctccagaacgtgtccgacaca
aacttccagctggcagacccggtcctcacagagcgccagcccacagtgtcgatggagctg
ctctcactcaatgttaaaacacaacagccggtgtgcagtcagcagtcagtgttctgcctg
tgggagatgcgttgggccaaacccctcccgctgtgcctgcagtgtgcgttctccgccagc
ttcgcgcccgtctccgcctcggacgcacacacagccttcaaaccctactgctacgagttc
cagctggaccgggtctctaccctttacagcttgaaggccgagatcttgccgccgtccggc
gaccagcactgtcgcaccggcgccctctgtggcctcgaggtgtccatcacacggcaggcg
gagcccagcgagactgaaggggaggaggaggagtctacagaaatagagggcctgaggacc
accaagctcatgtatgaagtggtggacaacagcagtaactgggcggtgtgtggcaagagc
tcgggggtggtgtccatgcccgtggctgccagtgccacacacaaggttcagatggaggtc
atgcccctgttcgccggtcacctgcccttccccaacatcaaagtgttcaagtacctgccc
cacaatgccgtcccagccattcagcccgacacagacagctgcttagagaacgacaccata
tccctgctggacaaaggactagacgaccagggcgacacggccagcatccgcagccggggc
agcgtccactcagtgggcagcggggagcagcagaggggtctgcccatgccccgcctggag
cccttcactccgggacaggtgttctattggagccaggggcggcaggtgctggtgctgccc
gttactgacgaccacgtgatggaggttaacgtcacatga
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