Salvelinus namaycush (lake trout): 120033439
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Entry
120033439 CDS
T07522
Name
(RefSeq) cohesin subunit SA-1
KO
K06671
cohesin complex subunit SA-1/2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120033439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120033439
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
120033439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
Cnd3
Motif
Other DBs
NCBI-GeneID:
120033439
NCBI-ProteinID:
XP_038835726
UniProt:
A0A8U0U1P4
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All DBs
Position
Sna40:complement(14294950..14329307)
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AA seq
1262 aa
AA seq
DB search
MITSELPVLQDSSNESGAADTVSLSVSVSELEDPTDTKGKKKRGRPGRPPAANKKPRKSP
AEKATGGAKGRKANGVPQTNGEGGDPVTLFEVVRMGKSAMQSVVDDWIESYKQDRDIALL
DLINFFIQCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPLWKKFRYNF
CEFICVLIRQCQYSIIYDEYLMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVAL
NLSIHQDNTQRQYEAERNKMAGKRANEKLELLLQKRKELQENQDEIENMMNSIFKGIFVH
RYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQNLY
TNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLITLILQGSEDALSNEDCENVYH
LVYSAHRPVAVAAGEFLHRKLFSRHDPQAEEELAKRRGRSSPNGNLLRMLVLFFLESELH
EHAAYLVDSLWESSQELLKDWECMTELLLEEPVQGEEVLSDRQESSLIELMVCTIRQAAE
AHPPVGRGTGKRVLTAKERKTQIDDKNKLTEHFIMALPMLLSKYQADSEKVANLLQIPMF
FDLDVYSAGRMEKHLDALLKQIRLVVEKHIETDVLEACSKTYSILCSEEYTIMNRVDIAR
SQLIDEMTDRFTHSVEDLLQEAEEADDDDIYNVLSTLKRLTAFHNAHDLTRWDLFGSCYR
LLKAGIEQGAMPEQIAVQALQCSHYSILWQLVKITEGTPSKEDLVALRRVVKSFLAVCQQ
CLSNVNTPVKEQAFMLLCDLLMVFSHQLVSGGREGLEALVFNPDSTLQNELLTFILDHVF
IDQDDENQSMEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIVDMPAAADIFKHYMKYYN
DYGDIIKETLSKTRQSDKILCAKTLILSLQQLFNELLQDQGPTLDRTSSHVSGIKELARR
FALTFGLDQIKTREAVATLHKDGIEFAFKYQNPHGAEFPPPNLAFLEVLSEFSSKLLRQD
KKTVHSYLEKFMSESMSERREDVWLPLISYRNSLLTGGEDGDRMSVTSGASSKTSSIRSK
KGRTPIHKSKRIEEESSVEASWLRGNDSLQTPGALTTPQLTSTVLRENPRQAADTHLPDH
DSEPGSENDYVHNPQMQMSWLGQQKMEDSRKDRTAMNYMKARNQTVRQTVRGLMEDDAEP
IFEDVMMSSRGQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAMIEDESGFTIP
MF
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgatcacctctgagctgcctgtcctacaggactcgtccaatgagagcggagcggcagac
acagtgagtctgagtgtgagtgtgagtgagctggaggacccgacagacactaaaggcaag
aagaagagagggaggcctggcagaccaccagcagccaataagaagcctcggaagtcccca
gcggagaaggctacaggcggggctaaagggaggaaggccaatggggtccctcagaccaac
ggtgagggaggagaccccgtcactctgtttgaggtggtcagaatgggaaagagtgccatg
cagtctgtggttgatgactggatcgagtcgtacaagcaggacagagacatcgccttactg
gacctcatcaacttctttatccagtgttctggctgcaaaggcaccgtgcgcatcgagatg
ttccggaacatgcagaacgctgagatcatcaggaagatgacagaggagtttgacgaggac
agtggggactaccctctcaccatgcccgggccgctgtggaagaagttccgctacaacttc
tgtgagttcatctgcgtattgatacgtcagtgccagtacagcatcatctacgatgagtac
ctcatggacacggtcatatccctcctcacgggactgtctgactcacaggtcagagctttc
agacacaccagcacactggcagcgatgaagttgatgacagcgttggtgaacgtagcgttg
aacctcagtatccaccaggacaacacccagagacagtatgaggctgagaggaacaagatg
gccggaaaacgagccaatgagaagctagagctgctgctgcagaagaggaaggagctccag
gagaaccaggatgagattgagaacatgatgaattctatcttcaaaggaatctttgtccac
cgctacagggatgctatagctgagatcagagctatctgtattgaggagattggggtgtgg
atgaagatgtactctgacgccttcctcaacgacagctacctgaaatatgtaggatggacc
ttacacgaccggcaaggcgaggtacgtctgaagtgtttgaaggccctccagaacctgtac
accaacagagagctgtttcccaaactggagctgttcaccaaccgcttcaaggaccgcatc
gtgtccatgactctggataaggagtatgacgtggctgtggaggctattagactgatcacg
ctcatcctgcagggcagtgaggatgcgttgtccaatgaggactgcgagaatgtctaccac
ctggtttactccgcccacagacctgtcgccgtggcagcaggagagttcctgcacaggaag
ttgttcagcagacatgacccccaggcagaggaggagttggctaagaggagagggaggagc
agccccaacggcaacctcctccgcatgctggtgctgttcttcttggagagtgagcttcat
gaacatgcagcctatctggtggactctctgtgggagagttctcaggagctgctgaaggac
tgggagtgtatgactgaattactgctggaggagcctgtacaaggagaggaggtgctgtca
gacagacaggagagttccctgatagagttgatggtgtgcaccatccggcaggcagcagag
gctcacccacccgtcggcaggggcactgggaaacgtgttctcacggcgaaggagaggaag
actcagatcgacgacaagaacaaactgacagaacacttcatcatggccctgcccatgctc
ctgtccaagtaccaggccgactctgagaaggtggctaacctgctacagatccccatgttc
tttgacctggacgtgtacagcgctgggcgtatggagaagcacctagatgccttactgaag
cagatccgcctggtggtagagaaacacattgagacagacgtgctggaggcctgcagtaag
acctacagtatcctgtgttctgaagagtacaccatcatgaacagagtggacatcgcccgc
tcgcaactcatcgacgagatgacggaccgcttcacacactccgtagaagacctgctgcaa
gaggccgaggaggccgacgacgacgacatctacaacgttctgtcgaccctaaagagactc
acggccttccacaatgctcatgacctgacgcggtgggacctgtttggtagctgctacagg
ttgttgaaggctggtattgagcagggggccatgccagagcagatcgctgtccaggccctg
caatgttcccactactccatactgtggcagctggtgaagatcacagagggaactcctagt
aaggaggacctggtggctctgaggagagtggtgaagtccttcctggctgtctgtcagcag
tgtctgtccaatgtcaacacacctgtcaaagaacaggccttcatgttgttgtgtgacctg
ctgatggtcttcagtcaccagttggtctctgggggcagagaaggcctggaggccctggtg
ttcaacccagacagcaccttacagaacgagctgctcaccttcatcctggaccacgtcttt
atagaccaggacgatgagaaccagagcatggaaggcgatgaggaggatgaagccaataag
atagaagctcttcacaagaggagaaacctgctagcagccttcagcaaactcatcatctat
gacatcgtggacatgcccgctgcagcagacatcttcaaacactacatgaagtattataat
gactatggtgatatcatcaaggagactctcagtaagaccagacagagtgataagatcctc
tgtgccaagaccctcatcctcagtctgcaacagctgttcaacgagcttcttcaggaccag
ggtcctactctggacagaacgtcgtctcacgtcagcggcatcaaggagttggcccggcgc
ttcgcactcaccttcggcctggaccagatcaaaaccagagaggctgtcgctacactgcac
aaggatggtatagagtttgcctttaagtaccagaacccccatggtgcagagttccctcct
cctaacctggccttcctagaggtcctctcagagttctcctccaaactgctgcgacaggac
aagaagactgttcactcgtatctggagaagttcatgtcggagtcgatgtcggagcgtcgt
gaggacgtgtggctgccgttaatctcctaccggaacagtctgctaacaggaggagaggat
ggggatcggatgtcggtaacatcaggcgccagcagcaagaccagctccatccgcagcaag
aagggacggacgccaatacacaagagtaaacgcatcgaggaggagagtagtgtggaggcc
tcctggctgcgtggtaatgacagcctccagacaccgggggcgctaaccacccctcagctc
acctccaccgtcctcagagaaaacccacggcaggcggcggacacacacctacctgaccac
gactctgaacctggctcagagaacgactatgtacacaatccccagatgcagatgtcttgg
ctaggccaacagaagatggaggacagcaggaaggatagaacagccatgaactacatgaag
gcccgcaaccagactgtcagacaaactgttcgtggtctgatggaggatgacgcagagcca
atctttgaagacgtcatgatgtcatcgcgaggtcaactggaggacatgaacgaggagttc
gaagacaccatggtcatcgacctgcctccctccaggaacaggcgtgagagggcggagctc
agaccagacttcttcgactcagcagccatgatcgaggacgagtcgggtttcaccataccc
atgttctga
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integrated database retrieval system
