Salvelinus namaycush (lake trout): 120033461
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Entry
120033461 CDS
T07522
Symbol
zgc:92380
Name
(RefSeq) keratin, type I cytoskeletal 18
KO
K07604
type I keratin, acidic
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120033461 (zgc:92380)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120033461 (zgc:92380)
04147 Exosome [BR:
snh04147
]
120033461 (zgc:92380)
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
120033461 (zgc:92380)
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
120033461 (zgc:92380)
Exosomal proteins of other body fluids (saliva and urine)
120033461 (zgc:92380)
Exosomal proteins of colorectal cancer cells
120033461 (zgc:92380)
Exosomal proteins of melanoma cells
120033461 (zgc:92380)
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Gene cluster
GFIT
Motif
Pfam:
Filament
TPR_MLP1_2
Crescentin
INO80F
DUF1664
PUMA_CC
Motif
Other DBs
NCBI-GeneID:
120033461
NCBI-ProteinID:
XP_038835755
UniProt:
A0A8U0Q2W2
LinkDB
All DBs
Position
Sna40:19090969..19094864
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AA seq
364 aa
AA seq
DB search
MSSNRAFSMFGGAGGRGSRVSVASLEGLRNAMRSDPENSNDVSPAPGPAPDDKKTMKGLN
DRLSGYLGKVRNLEEANKDLEDQIQDILDKRGDPNGRDWDVVEKPLNDLRKKLRDMTMDN
ARLLLQIDNTKLANDDFKNKLDNEKQARKTVERDLIGLKKMIDDTNLNRMQLESQVESVM
EELAVLKKDHKDDVDELRKKIKDSNVLVEFDSQDNNLSDTLNKIRSQYEKLAKKNLKDTD
DWYQSKFDSIKVEVVQNTEALHSGKNELKDLRRQRHLLEIDIQSIMSLVHSHEESLKDTD
GRYNREMTRLNKILLQLEGELVQVRTQVERHVDDYQELLHVKMKLEAEIENYRSLMHDIA
PDDR
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtaacagagcctttagcatgttcggtggggccgggggaagaggctccagggtg
tccgtggccagtctggaggggctacggaacgcgatgcgttctgacccagagaattcaaac
gatgtctctcctgcccccgggcccgccccggatgataagaagaccatgaagggtctcaac
gaccgtctgtccggctacctgggcaaggtgaggaacctggaggaagccaacaaagatctg
gaggaccagattcaggacatcttggacaagagaggagaccccaacggccgcgactgggat
gtggttgagaaaccgttgaatgacctcaggaagaagctccgtgatatgaccatggataat
gcacgtttgttactgcaaattgacaacaccaaactggccaatgatgacttcaaaaacaag
ctggacaacgagaagcaggccaggaagactgtggagcgggacctgattggtctgaagaag
atgattgacgacaccaacctgaaccgcatgcagctggagagccaggtcgagtctgtgatg
gaagagctcgccgtcctcaagaaggaccataaggatgacgttgatgagctgcgtaagaag
atcaaggactccaacgtcctcgtggagtttgactcccaggacaataacctgagtgataca
ctcaacaagatccgctcccagtacgagaaactggccaagaagaacctcaaggataccgac
gactggtaccagagcaagtttgacagcatcaaggtagaggtggttcagaatactgaggct
ctgcattcaggcaagaatgagctcaaagacctgcgcagacagagacacctcctggagata
gacatacagtctataatgagcttggtccactcccacgaggaatctctgaaggacacggat
gggcggtacaaccgtgagatgacccgcctcaataagatcctgctgcagttggagggagag
ctggtccaggtgaggacgcaggtggagaggcatgtggatgactaccaggagctgcttcac
gtcaagatgaagctggaggccgagatcgagaactaccgcagcctaatgcacgacatcgcc
cccgacgacaggtga
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