KEGG   Salvelinus namaycush (lake trout): 120033715
Entry
120033715         CDS       T07522                                 
Name
(RefSeq) desmin-like
  KO
K07610  desmin
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04519  Cadherin signaling
snh04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:snh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04519 Cadherin signaling
    120033715
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    120033715
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:snh04812]
    120033715
Cytoskeleton proteins [BR:snh04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     120033715
SSDB
Motif
Pfam: Filament Filament_head DUF8429 ZK652 ANG-1 Mua KIF21A_4th DUF7491 COLEC12 CLIP1 TolA_bind_tri DUF1664 CCDC89 WXG100 DUF7432 GeBP-like_DBD Phage_scaffold
Other DBs
NCBI-GeneID: 120033715
NCBI-ProteinID: XP_038836081
UniProt: A0A8U0Q1J2
LinkDB
Position
40:complement(8113063..8119039)
AA seq 484 aa
MSSYRSSAQSAQSGSSSYRRTFGTGYSPAMSHSLYSSRGSGGGLGLGHGGSGHISSRVYE
VTKTSASPSYSGYRTSSHFGGPVMSSTAHGSRSYAGMGETLDFSLADALNQEFLHTRTNE
KVELQHLNDRFASYIEKVRFLEQQNATLVVEIERLRGREPTRIADLYEEEMRDLRRQVEA
LTNQRSRVEVERDNLGEDLDKLKLRLQEEILQREDAENNLAAFRADVDAATLARLDLERR
IETLQEEIAFLKKIHEEEIREMQSQMQETQVQIQMDMSKPDLTAALRDIRAQYEGIAAKN
ISEAEEWYKSKVTDLNQAVNKNNEALKEAKMETMEFRHQLQSYTCEIDSLKGTNESLMRQ
MRDMEERHGREAGGFQDTISRLEAEIANMKDEMARHLREYQDLLNVKMALDVEIATYRKL
LEGEESRISLPIQNYSTMTFRETSPEHHHRVAESHSKKSVLIKTIETRDGEVVSESTQHQ
QDIM
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgagctcctaccgctcttctgctcagtcagcccagtctggctcctcctcctaccgccgc
acctttggcacagggtacagccctgccatgtcccattccctctacagcagccggggctcg
ggcggggggctcggactcggacatggcggctccggccacatctcctccagggtctacgaa
gtcaccaagacttccgcctcgccctcttactccggctaccgcacctcgtctcacttcggc
ggacctgtgatgtcatcgaccgcacacggttcgcggtcctatgcggggatgggggagaca
ctggacttcagcctggccgacgcgctgaaccaggagttcctccacacgcgcaccaacgag
aaggtcgagctgcagcacctgaacgaccgcttcgccagctacatcgagaaagttcgcttc
ctggagcagcagaacgctacattggtggtggagattgagaggctgcgggggcgtgaaccc
acacgcatcgccgacctgtacgaagaggagatgagggacctgcgtcgccaggtggaggcc
ttgaccaatcagaggagccgcgtcgaggtggagagggacaacctgggcgaagacttggac
aaactcaaactcagactgcaggaagagatccttcagagggaggacgcagagaacaacctg
gctgctttcagagctgatgttgatgctgccactctggcccgtctagacttggagagacgc
atcgagacactacaggaagagatcgccttcctcaagaagattcacgaggaggagatccgt
gagatgcagtcccagatgcaggagacccaggtgcagatccagatggacatgtccaagccg
gacctgacagctgccctcagggacatcagggctcagtacgagggcatcgccgccaagaac
atctcggaggcagaggagtggtacaagtctaaggtgacagacctgaaccaggcggtgaac
aagaacaatgaggctctgaaggaggccaagatggagaccatggagttcagacaccagctc
cagtcctacacctgtgagattgactcacttaaaggcaccaacgagtctctgatgaggcag
atgagagatatggaggagcgccacgggcgggaggcgggcgggttccaggacaccatctcc
cgtctggaggctgagatcgccaacatgaaggatgagatggccaggcacctgagagagtac
caggacctgctcaatgtcaagatggccctggacgtagagatagcaacctacaggaaactg
ctggagggagaggagagcaggatttccctgcccatacagaactattccaccatgactttc
cgtgaaacgagtccagagcatcatcaccgcgttgctgagtcacactcaaagaaaagtgtc
cttatcaagaccattgagacccgtgacggagaggtggtctctgagtcaacacagcaccag
caggatatcatgtaa

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