KEGG   Salvelinus namaycush (lake trout): 120033895
Entry
120033895         CDS       T07522                                 
Name
(RefSeq) elongin-B-like isoform X1
  KO
K03873  elongin-B
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    120033895
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:snh04121]
    120033895
   03400 DNA repair and recombination proteins [BR:snh03400]
    120033895
Ubiquitin system [BR:snh04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     120033895
   Cul5 complex
     120033895
DNA repair and recombination proteins [BR:snh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     120033895
SSDB
Motif
Pfam: ubiquitin Ubiquitin_4
Other DBs
NCBI-GeneID: 120033895
NCBI-ProteinID: XP_038836197
UniProt: A0A8U0Q573
LinkDB
Position
41:21864406..21867959
AA seq 155 aa
MRAFCDSRSAAWDSGGATDRPREMDVFLMIRRHKTTIFTDAKESTTVYELKRIVEGILKR
APEEQRLYKELPKSALTSLLYQDDMLLEDSKTLGDCGFTNQTARPQAPGTVGLAFRLGDD
AFEQLRVEPFSSPPELPDVMKPQDSGSTANEQAVQ
NT seq 468 nt   +upstreamnt  +downstreamnt
atgagagcgttttgtgattctcgcagtgcagcgtgggatagcggaggcgcaaccgaccga
ccgagagaaatggatgtgtttctgatgatccggcgtcacaagacgaccatcttcactgat
gccaaagagtcaactacggtctacgagctgaagcgcatagtggagggtatcctaaagagg
gcaccggaggaacagaggctgtacaaggaactccccaagtctgctctgacatctctcttg
tatcaggatgacatgttgctggaggatagtaagactcttggagactgtggcttcacaaat
cagacagccagacctcaggccccagggactgttggattagctttccgtctcggtgatgat
gcatttgagcagctgagggttgagcccttctccagccccccagagcttcctgacgtcatg
aagcctcaggactctggcagcacagccaatgagcaggccgtgcagtga

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