Salvelinus namaycush (lake trout): 120033961
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Entry
120033961 CDS
T07522
Name
(RefSeq) rho GTPase-activating protein 23-like
KO
K20315
Rho GTPase-activating protein 21/23
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120033961
Membrane trafficking [BR:
snh04131
]
Endosome - Golgi transport
Others
Others
120033961
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
120033961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
PDZ_6
PH_9
PDZ
PH_11
PDZ_2
Motif
Other DBs
NCBI-GeneID:
120033961
NCBI-ProteinID:
XP_038836287
UniProt:
A0A8U0Q5D1
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All DBs
Position
Sna41:complement(5123822..5154816)
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AA seq
1683 aa
AA seq
DB search
MDTIFVKNVRERGPAHQGGLCTGDRLVKVNGESVLGKTYSQVIALIQNSESVLELSIMPK
DEDVLQLAYSQDAYLRGNEPYTGGARNLPVPPPLCYAPRTKSQPPAGAPAPMGQNQLDNW
SRWAGSASPMSPLDNRSTVGSPASWQEGLGGEPGGVGHSSPPYRTEEIQYGVTGQQPTGQ
TRGRSYSSSSSSGGPLSSPLHVHYVNHNAAGTATTASSQPQKGSQAWASPPQPSPSRSQH
CQQALSEWYYSQAAEQRQGRSGSMHQRHRSYSQDRLCETGPGCHRRSPGGWPHSASQDTL
MLLQQSGPGPHGDPSWTYGDWEGARDQSHPSSYGSRARSENLLVQYDRYGRSMEMLESPR
SERPAWLKQASQQAPRTEAYQRQGNHYGVAPAPSMGRQAQPHHKNHPQPHSQSHPQPQPQ
QPAPQSRRLPTGQSLDDQPVGYRSYSPSFNRKTGRIMQQPSFRDPSYLGPHLSWAPTPKT
SPPEGVVPSVPSPLASTTPETLDRAYRPTNHERGAVEGQVEVVAQTQEVKLRQKPPTGRR
SAHAMRHPHYTLPVDGTEPPVFPPDPHDAAPAPRPSGDGAPHRTNGNLAPLSVEDDAMAS
IPFIDEPTSPSADLRARHVPASSVVSSGMSSAPAIVTSPASPTFTFPLTRLFSHDCSGIK
SSRRSSYLLAITTERSKSCDEGLNTFRGEEGRGVSRLPKRVKSFFTVGSLDSLGAAEEVR
SKRHSTSELGSISYSDIWREGWLHYKQILTEKGKKVGSGMRPWRRVFSVLRSHSLFLYKD
KREAVLRGATLGGDADEEQPISIRGCLVDIAYSETKRKHALRLTTQDFCEYLLQAEDRED
MLDWIKVISENSKTDNEELGFSRQALISKKLNDYRKQSPTGNKPDSSPRVSRAKPSFLLA
KMENAAGAPRSPKPEGKDESSPPKSPWGINIMKKSKKSGPKAFGVRLEDCQPAANNKFIP
MIVEICCGLVEEMGLEYTGIYRVPGNNAVVSSLQDQLNKGSDINPAEEKWQDLNVISSLL
KSFFRKLPEPLFTDDKYNDFIDANRMENAGDRLKTMKKLIRDLPDHYYHTLKFLVGHLKT
VADHCEKNKMEPRNLALVFGPTLVRTSEDNMTDMVTHMPDRYKIVETLIQHYLWFFSEDL
DKDEKTPVDTKDLVPAPNIDHLLSNIGRTALLGEASDSTNSDSAKSKGSWGSKRDLTAKD
FLTLSIMSAVTGRKRRNRYNGRLVGSSTDDDSEHEPIKASHLGVEEGEEAGLVVAGADTA
PRAEGEEEEDDEEEEEEEEESVVERVRVQVEVKEVVVPSMPCGGEKEKAGQTVMLLPEEE
AVTAEVKGRAWRGPEDARSIVSGYSTLSTLGRSLASEGRCDEADDERSELVSETDNESGF
ASRSLTQERPEKHPPASITHTLTPPTPTQPPTQPPTAAQRSFLYTHYKPHPISATPQHTT
PTPSTHTQDPGERSEGGARSTTPSSSSFSSSSTTHRLHSRPSFNSHKLIQCDTLARKKLK
DRGKTKARSLDLLDLPVPSGEEEGAGAPGAQRDRSRTNPSTGSSQESLRPARPKESLPPS
EAASFTPSGTGQGQGRGSLADQVRARLLGSADDLRIVGLRKPLSPETRRKRRAWRRHTVV
VSPTETGDKRPALATKVFPMSPATSKPQGSPLDPQELDPRHPLPLGQNPPATRAPASRFH
QYL
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atggacaccatatttgtcaagaatgtgagagagcgaggtcccgctcaccagggtggcttg
tgtacaggggatcggctggtgaaggtgaatggagagagtgtcctggggaaaacgtactcc
caggtgatcgccctcatacagaacagtgagagtgtgttggagctctctataatgccaaaa
gacgaagacgttctgcagctggcatactcccaggatgcctacctgaggggcaacgagcct
tacacagggggagcccggaaccttccggtacccccgcccctctgctacgctccccgcacc
aagtcccagcctcccgccggggccccggcccccatgggccagaaccagctggacaactgg
agccgctgggcaggctccgccagccccatgtcccccctggacaaccgctccaccgtgggc
agcccggccagctggcaggagggactgggcggagagccggggggcgtgggccacagtagc
cccccctacaggacagaggaaatccagtacggtgtgaccgggcagcagcctacgggacag
acaaggggtcgctcctactcctcatcttcttcttcaggagggcccctcagcagccctctg
catgttcactatgtcaaccacaatgctgctggcactgccaccaccgcctcctctcagccc
cagaagggcagccaggcctgggccagccctccccagccgagccccagccgtagccagcac
tgccaacaggccctgtctgagtggtactacagccaagctgctgagcagcgccagggccgc
agtggcagcatgcaccaacgccaccgcagctactctcaggacaggctgtgtgagacaggc
cctgggtgccaccgccggagtccgggcggctggccccacagcgcctcccaggacaccctg
atgctactgcagcagtcgggccccggcccccacggggacccttcttggacctacggagac
tgggagggggcccgggaccagagtcacccctcctcctacggcagcagagcccggtcggag
aacctgctggtacagtacgaccgctatggccgttcgatggagatgttggagtcgccccgt
tccgagaggcctgcctggctgaagcaggcctcacagcaagcacccaggactgaggcctat
cagaggcaggggaaccattacggtgtcgcaccggccccctctatgggccgacaagcacag
ccgcaccacaaaaaccacccccaaccccactcacagtctcacccacagccccagccccaa
caaccagccccccagagcagacgtcttcccaccggacagagtctggacgaccagccagta
ggttaccgcagctacagcccctccttcaaccgcaaaacaggccgcatcatgcagcaaccc
tccttcagggacccctcctaccttggcccccacctcagctgggcccccacccccaaaacc
agccccccagagggtgttgtcccctcagttccatcccccctggcctccaccacccccgag
acccttgacagggcctaccgccccaccaaccatgagaggggggcagtggaaggtcaggtg
gaggtggtagctcagacccaggaggtcaaactgagacagaaaccccccacgggacgaagg
agcgcccacgccatgcgccacccccactacaccctgcctgtagatggcacagaaccccct
gtgttcccccctgacccccacgacgctgcccccgcccctcgcccctcaggagatggtgcc
ccgcaccgtaccaatggcaacctggcccccctgtctgtagaggatgacgcaatggcctcc
attccctttatagatgagccaacgagccccagcgctgacctccgtgcccgccacgtaccc
gcctcctccgtggtgtccagcggcatgagctcagcgcccgccatcgtcaccagccccgcc
tcccccaccttcaccttccccctaaccaggctcttctcacacgactgcagcggtattaaa
tccagtcgccgttcctcctatcttctagccatcaccacggagcgctccaagtcatgtgac
gagggactcaacaccttcagaggagaggagggacgcggcgtctcgaggctgccaaagaga
gtgaagagtttcttcactgttgggtctctggacagtctgggggcagcggaggaggtgcgc
tccaaacgccactccacctcagagctgggcagtatcagctacagtgacatatggagagag
ggatggctgcactacaaacagatcctcacggagaagggcaagaaggtgggcagcggcatg
cgtccgtggaggcgggtcttctcggtgttgcgctcccactcgctcttcctctacaaggac
aagcgggaggcggtcctgcggggcgccactctgggaggcgatgccgacgaggagcagcca
atcagcatccggggctgcctggtggacatagcgtacagcgagaccaagcgtaagcacgca
ctgcgtctgaccactcaggacttttgtgagtatctgctgcaggccgaagacagagaggac
atgctggactggatcaaggtcatcagtgagaacagcaagaccgacaatgaggagctggga
ttctcaagacaggctctgatcagtaagaagctcaatgactacaggaaacagagtccaaca
ggcaacaagccggactcctcgcccagggtgtcccgtgccaagccttccttcctgctggcc
aagatggagaacgctgccggggcgccgcgctcacccaaacctgagggcaaagatgagagc
agcccccctaagtcgccatgggggatcaacatcatgaagaagtccaagaagtcagggccc
aaggcttttggagtgcggctagaggactgccagccagctgccaacaacaagttcatccct
atgatcgtggagatctgctgtgggctggtggaggagatgggtctggagtacaccggcatc
tacagggtcccagggaacaacgcagtggtgtccagccttcaggaccagctcaacaagggg
tcggacatcaaccctgcagaggagaaatggcaggacctgaacgtgatcagcagcttgctc
aagtctttcttcaggaaacttccggagcccctcttcactgatgataagtacaatgacttc
atcgacgctaaccggatggagaatgccggggaccggctaaagaccatgaaaaaactgatc
cgtgacttaccggaccattactaccacactctcaagttcctggttggccatctgaagacg
gtagctgaccactgtgagaaaaacaagatggaacctcgtaacttggccctggtgttcggg
cccacgctggtgcggacgtctgaagacaacatgacagacatggtgactcacatgcctgac
cgctacaagatagtagagacgctcatccaacattatctctggtttttcagtgaggacctg
gacaaggatgagaagactccagtagacacgaaggacctggtgcctgcccccaatatcgac
cacttgctctccaacattggcaggaccgctctgctcggggaggcgtcagactcaaccaac
agtgactcagctaaatctaaggggtcgtgggggtcaaagcgagacctcactgccaaggac
tttctgaccctgtccatcatgtccgccgtcaccggacgcaagcgcaggaatcgctacaac
ggccgcctcgtgggcagcagcacagacgacgactcggagcacgagccaatcaaagccagc
cacctgggggtggaggagggagaagaagcggggctggtggtggcaggagcagacaccgcc
ccacgagcagagggagaggaggaggaagatgatgaggaggaggaagaagaagaagaagag
tctgtagtagagagagtgagagtgcaggtggaggtaaaagaggtggtagttcccagcatg
ccgtgcggtggtgagaaagagaaagcagggcagacggtgatgctgctccctgaggaagag
gcggtgacggcggaggtgaagggcagggcgtggcgggggccagaggacgctcgctctatc
gtctccggttactccaccctctccacactggggcggagcctggcgtctgagggacggtgt
gatgaagctgacgacgagcgcagcgagctggtgagcgagacggacaacgagagcggattc
gcctcacgctcccttacccaggagagacctgagaaacacccccctgcatccattacacac
accctcacaccccctacccccacacagccccccacacaaccccccacggcagcacaacga
agcttcctctacacacactacaaaccccaccctatctccgccacaccccagcacaccacc
cccaccccctccacacacactcaggaccctggggagaggagtgaaggtggggcgcgatcc
accaccccctcctcctcctccttctcgtcgtcctccaccacccacagactgcactcccgg
ccctccttcaactcccacaagctgatccagtgtgacacgctggccaggaagaagctaaag
gacagagggaagaccaaggctcgttctctggacctgctggacctccctgtgccttcagga
gaggaggagggagctggggcaccaggggcccagagggaccgatccaggaccaacccttcc
acaggtagcagccaggagagcctacgtccagcccgacccaaagaatccctgccgcccagc
gaggctgcctctttcacccccagcgggacagggcagggtcaggggcgagggtctctggct
gaccaggtgcgtgcgcgcctgctgggctcggctgatgacctgcgtatcgtggggctgagg
aagccactctccccggagacgaggaggaagagacgggcctggagaagacacactgtggtg
gtctcacctaccgagacgggcgacaagaggcctgcgctagccaccaaagtattccccatg
tcgccggccacttccaaaccacaggggtcacccctcgacccccaggagcttgacccaaga
catcctcttcccctgggccagaatccccccgccacacgcgcaccagcctccaggttccat
cagtacctgtaa
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