Salvelinus namaycush (lake trout): 120033985
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Entry
120033985 CDS
T07522
Name
(RefSeq) myoferlin-like
KO
K22125
myoferlin
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120033985
Membrane trafficking [BR:
snh04131
]
Endosome - Lysosome transport
Others
Ferlins
120033985
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerI
FerA
PI3K_C2
Pex24p
Motif
Other DBs
NCBI-GeneID:
120033985
NCBI-ProteinID:
XP_038836314
UniProt:
A0A8U0Q6M1
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Position
Sna41:8938193..9005880
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AA seq
2022 aa
AA seq
DB search
MLRVVVESAKGIPKKKLGNPDPIAAVVFKGEKKKTKAIDSELNPVWNEVLEFDLKGSPLD
ASSFLDVIVKDYETIGKDKFIGSAKIALLDLAHGHTKSLPAKNLSLVNEKKQDTGATINL
MIGYEPPANTTPNPNNQTDEDQSYGDTGGGEEGEDGEEGSLGGQVGTPGVPPTPGQPGNP
NQRPVRTSRKRHRALANKPQDFQIRVRVIEGRQLPGNNVKPVVKVNVCGQTHRTRIRRGN
NPFFDEMFFFNVNMLPSELLDDYISIRLDVGYIYDEPAHAIMRKWLLLSDPDDSSSGAKG
YLKVSLVIVGTGDEPPTEKRERNEEQDDIETNLLVPAGVTLRLVTLNLKVYRAEDMPQMD
DAFVQTVKQVFGGEGDKKNLVDPFLEVSFAGRKLCTKIIEKNANPEWNQLINLQVKFPSM
CESIKLTIFDWDRLTRNDVIGTTFLNLTKIASSGGEIEVNSGEAEVGFLPAFGPCYLNLY
GSPREFTGLPDPYEELNFGKGEGVAYRGRVLIELSTQLEGKADRKLDDISSDDILVAQKY
QRRRKFSLCAVFHSSCMLQEPGEPIQFEVSIGNYGNKLDSTCMPLASTTQYSCAVFDGNH
YYYLPWADTKPVVILTSFWEDISHRLDSVNIILYIADRLESNLTSLRTAILAKASEVRLA
EIWLKLINHMIEDLSNFQVPELEGRPNLTALDVQIKKLRDSAVASIREMAKHLKEEATDV
IATLTDIEDWLERLKQLAEEPQNSMPDVVIWMLRGERRVAYARLPANQILYSTYSEQACG
KYCGRTQTIFMQYPMDKNKGVKIPVQLRVNMWLGLSAHEKKYNSFSEGTFSVFAEMYENQ
AQVFGKWGTTGLVCRHKFSDVTGKVKLKQERFMPPRAWEWEGEWFVDPERGLLTEADAGH
TEFTDEVFQNETRFIGGEWKPAADPFTDVNGQKSQSPGEIECPAGWTWEDDWSFDSNRAV
DEKGWEYGVTIPPDDKPKSWGAAEKMYHIHRRKRLLRPRRKIADTKAAPERRDPGEGWEY
SSLIGWKFHRKERSSDTFRRRRWRRKMAPSDGIGASAIFKLEGALGVDVDEKASKKDAAR
LFGANTPTVSCNFDRSYMYHLRVYVYQARNLIAMDRDSFSDPYAHVSFLHVSKTTEVIRA
TLNPTWDQTLIFNDIEIYGDPQTIAHNPPNVVLELYDSDQVGKDEAMGRCTCPPVVKLNL
GTVVSPKLLWFPVTKKGRSAGEMLVAAELLLKDKANESDLPLVPPRRGATLYMVPQGIRP
VVQLTAIEVLAWGLRNMKTYQLATVTSPSLMVECGGEVVQTAVIKNIKKNPNFPGSVLFF
KVLLPKEEMYTPPIVLKVIDHRPFGRKPIVGQCTLSLEEFRCDPYVTNAEVAMSSKVAMM
AATQGDIIINMEDRPILNTELHKEKEEEAVDWWSKFYASVGEHEKCGPYLKKGYDTLKVY
EGELEEVPDFRGLTDFCKTFRLQRGKTEDEDDDPSVVGEFKGSFRVYPLSDDPGVPAPPR
QFRELPESGLQECLVRIYVVRCMDLQPKDNNGMCDPYIKISLGKKTKDDRDDYKPNTLNP
EFGRMFEMSCFLPQDKDLKIAVYDYDLLSRDEKVGETVIDLENRLLSRFGAYCGLPQSYC
ISGTNQWRDQLKPSQILENLARLRGIPSPRTSADSSTLSFEGRDYSLQDFEANKVIHQHL
GPARERMALHVLSKQGLVPEHVETRTLYSTYQPTLSQGKIQMWVDIFPKSLGLLGPPCHI
TPRQAKKYFMRAIVWNTTDVILDETSITGESMSDIYVKGWMPGMEQDKQKTDVHYRSLDG
DGNFNWRFVFGFDYLPAEQLCLVSRKEHFWNLDQTEFRTPPKLIVQIWDNDKFSLDDYLG
TVELDLLHLIPPAKTPEKCSLKMLPGVTGSTPSKQPTPNSLFSQKSVRGWWPCMIEQDGK
HILGGKVEMTLEIVEEGEVEERPAGKGRDEPNMNPKLDFPNRPDTSFFWFTSPCKTMRFI
IWRRFKWIFIGLIVLLLVLLFLGILLYSLPNYISMKIVKPFS
NT seq
6069 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgcgtcgtagtggaatcagccaaaggcatccccaaaaagaaactcggaaaccca
gatcccatagcagcggtagtgttcaaaggtgaaaagaagaaaactaaggcaattgatagt
gaactcaatcccgtgtggaatgaagtgcttgagttcgacctaaagggctccccattggat
gcctcctcctttttggacgtgattgtgaaagactatgagactattggcaaagacaaattt
attggctcagctaagatcgctctcctagacctggctcatggtcacaccaagtccctccca
gcaaagaacctgtccctggtcaatgagaagaaacaggacactggggcgaccattaatttg
atgataggttatgagccgccagctaacacaactcctaaccctaacaatcaaactgatgaa
gaccagtcatatggggacacaggtgggggtgaggaaggggaggatggggaggagggatcc
cttgggggtcaggtggggacccctggagttccacccacacctggccagcctggtaacccc
aaccagaggcctgtccggaccagccgcaagagacaccgggccctggccaacaagccgcag
gacttccagattcgtgttcgagttatcgagggccgacagttgccgggaaacaacgtcaaa
ccggttgtcaaagtgaatgtgtgcggacagacccacagaaccaggatcagacgaggaaac
aatcccttctttgatgagatgttcttcttcaatgtcaacatgctgccttcagagctttta
gacgactatatcagtattcggttggatgttgggtacatatatgacgaacctgcccacgcc
ataatgaggaagtggcttctcctgagtgaccctgatgactctagctcgggggccaaaggt
tacctgaaggtcagcctggtcatcgtggggacaggagacgagccaccgactgagaagaga
gagcggaacgaggagcaagatgacatagagactaatctgttggtgccggctggggtaaca
ctcagattggtcactctcaacctgaaggtgtaccgtgcagaggacatgcctcagatggat
gatgcgtttgtacagactgtgaaacaagtatttggaggggaaggcgataagaaaaactta
gttgatccatttctggaggtcagcttcgctggcaggaagctgtgcaccaaaattattgag
aaaaatgccaatcctgagtggaaccagctgatcaaccttcaggtcaagttcccatccatg
tgtgaaagcatcaagttgactatattcgactgggatcgtctgaccaggaatgatgtgata
ggaaccacatttctaaatctgaccaaaatagcctcatctggtggtgagattgaagtgaac
agtggggaggcggaggtgggtttcctcccagcgtttgggccttgctacctaaacctgtac
ggcagtcccagggagttcactggcctcccagacccgtacgaggaactcaactttggcaag
ggtgaaggggtggcctacaggggcagagtcctcatcgagctctccactcagctggagggc
aaagctgacaggaagctggacgacatctccagtgatgacatcctggtggcccagaagtac
cagcggaggaggaagttctcgctgtgtgctgtgttccacagctcctgcatgctccaggag
cccggtgagccaatccagttcgaggtcagcatcggtaactacggcaacaagctggactcc
acctgcatgccgctggcatccacaacccaatacagctgtgctgtgtttgacggtaaccac
tactattacctgccctgggctgacaccaaacctgttgtcatcctcacatccttctgggaa
gacattagccaccgattggattcagtcaacatcatcctctacatcgcagatagactggaa
tccaacctcacttctttgagaacagccatccttgccaaagcctcagaggtgcgcttggct
gagatctggctcaaactcatcaaccacatgattgaggatctgagcaactttcaggtacca
gagcttgagggcaggcccaacctgacggcgctggacgtccagattaagaagctgcgtgat
tcggcggtggccagcatcagagagatggccaaacacttgaaggaggaggccactgacgtt
atagccactctgacagacatcgaggactggctggagagactgaaacagcttgcagaggag
ccccagaacagtatgcctgacgtggtgatctggatgctgcgtggagagaggagggtggcg
tacgcccgtctcccagccaatcagatcctctactccacctacagtgagcaggcctgtgga
aaatactgtggcaggacccagaccatcttcatgcagtaccccatggacaaaaacaaaggt
gtgaagatccctgtccagctccgtgtcaacatgtggctgggcctctctgcccacgagaag
aagtacaacagcttctcagagggaaccttcagtgtgttcgcagaaatgtatgagaaccag
gcccaggtgtttgggaagtggggcaccacagggttggtgtgccggcataagttctctgac
gtgacggggaaggtgaagctgaaacaggagcgcttcatgccccccagggcgtgggagtgg
gaaggcgagtggttcgtcgaccccgagagaggcctgctaacagaagcagacgcggggcac
acagagttcacagacgaggtcttccagaacgagacacgtttcattggcggggagtggaag
cctgctgccgaccccttcacagacgtgaatgggcagaagagccagagtccaggggagata
gagtgtcctgctggctggacgtgggaggatgactggagcttcgacagcaacagggctgtg
gatgagaaaggttgggagtatggcgtcactattccccccgatgacaagcccaagtcctgg
ggagcagcagagaagatgtaccacatccaccgcaggaagagactcttacgaccacgcagg
aaaatagcagacactaaagcagcacctgagaggcgggatcccggcgaaggctgggaatac
tcgtccttgattggctggaagttccacaggaaggagcgttcgtctgacacattccgccgt
cgccgctggagacgcaagatggctccgtcagatggaataggagcgtcagccatcttcaaa
ctggagggggcgctgggggtagatgttgatgagaaggccagtaagaaggacgcagccaga
ctgtttggtgccaacacacccaccgtttcctgtaactttgaccggtcgtatatgtaccat
ctgagggtgtatgtctatcaggccaggaatctcatcgccatggacagggacagcttctca
gatccctacgcccatgtgtccttcctccatgtgagtaagaccacagaggtcatcagggcc
actctgaaccccacctgggaccagaccctcatctttaatgacatcgagatctatggagac
ccccagaccattgcacacaacccccccaatgtggtgctggagctctacgacagtgaccag
gtgggtaaagacgaggccatgggtcgctgtacgtgtccccctgtggtgaagctgaacctc
ggcacagtggtctcccccaaactgctgtggttccccgtcaccaagaaaggccgcagcgca
ggagagatgctggtggctgccgagctattgctgaaagacaaggccaatgagagtgacttg
cccctggtgccccccagacgaggagcaacactctacatggttccccagggaatcaggcct
gtcgtacagcttaccgccatcgaggtcttagcctggggtctgaggaacatgaagacctac
cagttggccacagtcacctctcccagtctcatggtggagtgtgggggggaggtcgtccag
acggccgtcatcaagaacatcaagaagaaccccaacttccccggatctgtcctcttcttt
aaagtgctcctacccaaagaggagatgtacacccctcccatcgttctgaaggtgatcgac
caccggccgttcggcaggaagcccattgtgggccagtgtaccctctccctggaggagttc
cgctgtgacccttacgtcaccaatgctgaggtggccatgtcttccaaagtggccatgatg
gcagcaactcaaggagacatcatcattaacatggaggataggcccatccttaatactgag
ctccacaaagagaaggaggaggaggcagttgactggtggagtaagttctatgcctctgtg
ggagagcacgagaagtgtgggccgtacctcaaaaaaggatacgacaccctaaaggtgtat
gaaggggagctggaggaggtcccagatttccgagggctgacagatttctgtaaaacgttc
cgactgcagcgggggaagactgaggatgaggacgacgacccctcagtggtcggagagttc
aagggctcgttccgggtgtaccccctatctgatgacccaggggtgccagccccaccacgc
cagttcagagagctgcctgagagcgggttgcaggagtgcctggtcaggatctacgtggtg
cgatgcatggacctgcagcctaaagacaacaacggcatgtgtgacccttacatcaagatc
tctttggggaagaaaacaaaagatgacagggatgactacaaaccaaacaccctcaatcca
gagtttggcaggatgtttgagatgtcctgtttcctccctcaagacaaagacctgaagata
gccgtgtacgactatgacttgctcagccgagatgagaaagtgggagagacggtcattgac
ctggagaacagactcctctctcgcttcggcgcctactgtggcctgccacagtcctactgc
atctcagggaccaaccagtggagggatcagctgaagccctcccagatcctggagaacctg
gccagactgagagggatcccttcaccccgcacctctgctgacagcagcactctctccttc
gaggggagagactacagcctgcaggactttgaggccaacaaagtcatccaccagcacctg
ggtccagccagggagaggatggccctgcatgtcctcagtaaacagggtctggtgccagag
catgtggaaaccaggactctctacagtacttaccaacctacactgtcccagggaaagatt
cagatgtgggtggacatcttccccaagagcctgggtttactgggacctccctgccacatt
actccacgccaagccaagaagtacttcatgcgggctatcgtctggaacaccactgatgtc
atactagatgagaccagcatcaccggagagagtatgagtgacatttacgtcaaaggatgg
atgcctggtatggaacaggacaagcagaagacagacgtccattacagatccctggatggt
gacggcaacttcaattggcgattcgtctttggctttgactacctgcccgcagagcaactg
tgtctcgtttccaggaaagagcatttttggaatctggaccaaaccgagtttcggaccccc
ccaaagttgatcgtccagatttgggacaatgacaaattctcactggatgactacctgggc
acagtcgagctggacctgcttcatctgatcccccctgccaagacccctgagaaatgcagt
ctgaaaatgttaccaggggttacaggctccacaccttccaaacaaccaacgcccaactct
ctgttctcccagaagtctgtgcggggctggtggccctgtatgattgagcaggacgggaag
cacatcctgggtgggaaagtggagatgaccctggaaatagtggaagagggggaggtagaa
gagaggcctgctgggaagggccgggacgaacccaacatgaaccccaaactagactttccc
aatcgccccgacacttccttcttctggttcaccagtccatgcaagaccatgaggttcatc
atatggcgcagattcaaatggatcttcattggtttgatagtcctcctgcttgtgctcttg
ttccttgggatcctgctgtactccctaccaaactacatctcgatgaaaattgtgaagcct
ttctcttag
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