Salvelinus namaycush (lake trout): 120034060
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Entry
120034060 CDS
T07522
Name
(RefSeq) procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00310
Lysine degradation
snh00514
Other types of O-glycan biosynthesis
snh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120034060
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120034060
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snh01003
]
120034060
Enzymes [BR:
snh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
120034060
Glycosyltransferases [BR:
snh01003
]
O-Glycan biosynthesis
O-linked Gal type
120034060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
DUF6492
CAP59_mtransfer
Motif
Other DBs
NCBI-GeneID:
120034060
NCBI-ProteinID:
XP_038836404
UniProt:
A0A8U0Q6T4
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Position
Sna41:complement(481138..515766)
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AA seq
609 aa
AA seq
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MHRYIFLLSTALTLLFSGPAQGYFPEERWSPESPLLAPRVLIALVCRNSEHSLPYFLGTI
ERLNYPKDRVAIWVATDHNVDNTTAILRDWLVKVQKLYHYVEWRPQEEPTEYQDADSPKQ
WTNLRYAHVMKLRQAALDSARDMWADYFMVVDCDNLLTNPNVLWKLIKENKTIVAPMLES
RAAYSNFWCGMTSQGYYKRTPAYIPMRKQVRKGCFAVPMVHSTFLIDLRKEASRQLAFHP
PHPDYSWAFDDIIVFAFSARMADVQMFLCNKETYGYFPVPLRAHNSLTDEADSFLHSLLE
VNVRNPHVLPSEYIPAPVKIQDKLGFDEVFMINLKKRTDRRDRMLRTLYEQEIACKVIQA
VDGKAMNISEINALGIHMLPGYSDPYHGRPLTKGELGCFLSHYNIWKEIAERGLKSSLVI
EDDLRFEVFFKRRLMNLMSEVESQGLDWDLIYIGRKRMQVDHPEKSVPNIHNLVEADYSY
WTLGYMMSLQGAQKLLRAEPLKRILPVDEFLPVMFNKHPVSDYMEHFEERDLKAFSAEPL
LVFPTHYTGDSGYISDTETSVVWDNEKVRTDWDRARSGKTQEQAEISSEAQNSDVLQSPL
DSTATRDEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcaccggtacatcttccttctgtccaccgccctgacgttactgttctccggaccagct
caaggatacttccccgaagaacgctggagccccgaatctccacttcttgccccccgggtc
ctcattgcccttgtctgccgcaactctgaacattctctgccttatttccttggaactatc
gaacgtctgaattatcccaaggaccgcgtggcaatttgggtagcgacggaccacaatgtg
gacaacactacagccatcctgcgtgactggctcgtcaaggtccaaaaactctaccactat
gtggagtggaggccgcaggaggagcccacagagtaccaggatgcagacagcccgaagcag
tggaccaacctccgctacgcacacgtgatgaagctacggcaggcagcactggactccgca
agagacatgtgggcagactacttcatggtggtggactgtgataacctattgaccaatcct
aatgtactgtggaagctcatcaaggagaacaagaccatcgtagctcccatgttagagtcc
cgtgcagcctactccaacttctggtgtggcatgacctcccagggttactataagcgcacc
ccggcctacatccctatgagaaagcaggtgcgtaaaggatgcttcgcggttcccatggtg
cactccaccttcctgattgacttgaggaaggaggcgtcacgccagctggccttccacccc
cctcacccagactacagctgggccttcgatgacatcattgtcttcgccttctccgctcgc
atggcagatgtgcagatgttcctatgtaacaaagagacttatgggtatttccccgtgcca
ctgcgagcccacaactccctgacagacgaagcagacagcttcctgcattccttgttggag
gtcaatgtgcggaaccctcatgtgctgccctcggagtacatcccggcccccgtaaagata
caagataaactgggctttgatgaggtgttcatgatcaacctaaagaaacggacagaccgg
cgggatcgcatgctgaggactctgtacgagcaagagattgcctgcaaggtcattcaagcg
gtagacggcaaagcgatgaacatcagtgagatcaatgccctggggatccacatgctacca
ggctacagtgacccgtaccacggtaggcccctcaccaagggagagctgggctgcttccta
tcacactacaacatctggaaagagatcgcagagcggggtctaaagagttccctggtgatc
gaggacgatctgcgtttcgaggtcttcttcaagcgacgcctgatgaacctgatgagtgaa
gtggagagccaggggctagactgggacctgatttatatcggcaggaagaggatgcaggtg
gaccaccctgagaagtccgtgcccaatatacacaacctggtggaggctgactactcctat
tggacgctgggctatatgatgtcattacaaggagcccagaagctgctgagggcagagccg
ttgaagaggatattacccgtagatgagttcctccctgtcatgttcaataaacaccctgtc
tcggactacatggagcactttgaggagcgggacctgaaggccttctcggccgagcccctg
ctagtgttccccactcactacacaggagactcgggctacatcagcgacacagagacctcc
gtggtgtgggacaacgagaaggtgcgtacggactgggaccgggcccgctcggggaagacc
caggagcaggctgagatcagcagcgaggcccagaactctgacgtactccagtcacctctg
gacagcacagccacacgggacgaactatga
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