KEGG   Salvelinus namaycush (lake trout): 120034085
Entry
120034085         CDS       T07522                                 
Name
(RefSeq) histone deacetylase 5-like isoform X1
  KO
K11406  histone deacetylase 4/5 [EC:3.5.1.98]
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04371  Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:snh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04371 Apelin signaling pathway
    120034085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:snh03036]
    120034085
Enzymes [BR:snh01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     120034085
Chromosome and associated proteins [BR:snh03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     120034085
SSDB
Motif
Pfam: Hist_deacetyl HDAC4_Gln Clp1
Other DBs
NCBI-GeneID: 120034085
NCBI-ProteinID: XP_038836439
UniProt: A0A8U0U118
LinkDB
Position
Sna41:10865443..10979652
AA seq 1075 aa
MQSPVGGSEQGVGGGGGPVDLRTDPRLGPLGGGVDPAMREQQLQHELLLLKQQQELQKQL
LFAEFQKQHEVLTRQHEVQLQEHLKQQQEILAAKRQQELEQKRKLEQQRHEELEKQRLEQ
QLLMLRNKEKGKESAIASTEVKLKLQEFLLSKKEPGTPGGLNHSFTHKCWGAHHTSLDPN
SPPQSNTPGTPPSYKLPPLLGSYEGRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLR
RKDGTVISTFKKRAIEISVSSMCSSAPGSGPSSPNSSNSAIAENGSSGSVPNIHAEQLRS
LHQTLNADGTVSPLSLYTSPSLPNISLGLPANSHLTANQKLLQEAERQAIQTMRQGGALT
GKFVSTSSLPASCLPPGMQHDLDSTQAPNSHSSHSSLLQHVLLLEQARQQSALLSVPMYG
QSPLVTGERVSNSMRTVNKLPRHRPLSRTQSAPLPQSPQALQQLVMQQQHQHFLEKQKQY
QLNKILSKGVELPRQPPTHPEETEEELTETQEMQEEGAGSERLGEGRPQEQRLQKEESGE
TSPPSERLLTPLKGESTESDLEEEDDEDEAIELRECDEEGVPYGQHHLQQLNVFQASLSI
SGMPHRPLGRAQSSPATASVKGAPMGEVPIKHLFTTGLVYDTFMLKHQCMCGNTHIHPEH
AGRIQSVWSRLQETGLLGRCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKL
LGPISQKMYAVLPCGGIGVDSDTVWNEMHSSGAVRMAVGCVIELAFKVAAGELKNGFAVV
RPPGHHAEESTAMGFCFFNSVAITAKLLQQKLGVSKILIVDWDIHHGNGTQQAFYNDPNV
LYISMHRYDDGNFFPGSGAPEEVGVGPGVGFNTNIAWTGGVEPPMGDVEYLTAFRTVVMP
IANEFSPDVVLVSAGFDAVEGHQSPLGGYNVTAKCFGHLTKQLMKLAGGRVVLALEGGHD
LTAICDASESCVAALLGDELDPLPQAVLQQKPCPKAAASLERVIEIQSKHWSSLQRLAPT
VGQSLMDAQRREKDEADTVTAMASLTVDTEQAAASTVSTETSRSTEEPMEEEPVL
NT seq 3228 nt   +upstreamnt  +downstreamnt
atgcagagccctgtgggcggcagtgagcagggtgttggaggtggcggcggtcccgtggac
ctgaggacagatcccaggctgggacccctgggtggaggggtggatccagccatgagggag
cagcaactgcagcatgaactgctcctcctcaagcagcagcaggagcttcagaaacagctt
ctcttcgctgagttccagaagcagcatgaggtgctgacacgccagcatgaggttcagctg
caggagcacctgaagcagcagcaggagatcctggcggccaagcggcagcaggagctggag
cagaagaggaagctagagcagcagaggcatgaggagctggagaaacagaggctggagcag
cagctcctcatgctacgcaacaaggagaagggcaaagagagtgccattgccagtacggag
gtgaagctgaagctccaggagttcctcctgagcaaaaaagagcctggcacacctggcgga
ctaaaccattccttcacccataaatgctggggggcccaccacacctctctggaccccaac
tccccccctcagagtaacactccgggaacgccgccctcctacaaactacccccgctactg
gggtcctacgagggcagggacgatttccctctccggaagactgcctccgagcccaatctg
aaggtgcgttcgcggttaaaacagaaggtagctgagagacggagcagtcctctgctgagg
aggaaggacgggacagtgataagcaccttcaaaaagagagccatcgagatctctgtgtcc
tccatgtgcagcagtgcccctggctccgggcccagctcgcccaacagctccaacagcgcc
atcgcagagaacggctccagcggctctgtccccaacatccacgcagagcagctgcggtcc
ctccaccagacccttaacgctgatgggacagtcagtccgctgagcctctacacatccccc
tcgctgcccaacatctccctgggcctgccagccaactcgcacctcaccgccaatcagaag
ctgttgcaggaggcggagaggcaggccatccagaccatgcgtcagggtggggctctgacg
ggcaagtttgtcagcacctcgtccctgccggcatcatgcctgccacctgggatgcaacac
gacttagactccacccaggcccccaacagccacagcagtcactcctccctactgcagcac
gtcctcctgctggagcaggcccgccagcagagtgccctcctctcagtccccatgtacggt
cagtcgccgttggtgacaggggagcgggtgtccaacagtatgcgcacggtgaacaagcta
ccacgccaccggcccctgagtcgcacacagtctgcacccctcccccagagcccccaggcc
ctgcagcagctcgtcatgcagcagcagcaccagcacttcctggagaagcagaagcagtac
cagctcaacaagattctgtcaaaaggggtggagcttcctcgccaaccacccacccacccc
gaggagacggaggaggagctcacagagacgcaggagatgcaggaggagggggcggggtct
gagcgtctgggggaggggcgtcctcaggagcagaggctccagaaggaagagtcgggggag
acgtcgcccccttcagaacgcctgctgacccccctgaagggcgagagcacagagagcgat
ttggaggaagaggatgatgaagacgaggccatcgagctgagggagtgtgatgaggagggc
gtaccttacggccaacatcacctgcaacagctcaatgtgttccaggcgtccctgtccatt
tcgggcatgcctcacagacctctgggaagggcccagtcctcccctgccactgccagcgtc
aagggggctcccatgggtgaggtccccatcaagcacctcttcactacagggttggtgtac
gacacctttatgctgaagcaccagtgtatgtgtgggaacacccacatccacccagagcac
gccggccgcatccagagtgtgtggtcccggctgcaggagactgggctgctgggccgctgt
gagcggattcgggggaggaaggccacattggatgagatccagactgtgcattcagaatac
cacaccctgctgtacggcaccagtcccctcaacagacagaaactagacagcaagaagctc
ttaggtccaatcagtcagaagatgtatgctgtgttgccctgtggaggcattggggtggac
agtgacactgtgtggaatgagatgcactcctcgggcgctgtcagaatggctgttggctgc
gtcatcgagctggctttcaaagtggccgccggggaactgaagaacggctttgccgtggtg
cgtccaccaggccatcacgctgaggaatccactgccatgggcttctgcttcttcaactca
gtggccatcacagccaagctgctacagcagaaactaggagtgagcaagatactcatcgtg
gactgggatattcaccatggtaacgggacacagcaggctttttacaacgaccccaacgta
ctttacatttccatgcatcgctacgacgatggaaacttcttccccggcagtggggctcct
gaagaggtgggggttggacctggtgttggcttcaacacaaacatcgcttggacagggggt
gtagaaccgcccatgggggacgtggagtacctgactgccttcaggacggtggtgatgccc
atagccaacgagttctcccctgacgtggtcctagtgtccgctgggtttgatgccgtggag
ggccaccagtcccctctgggaggatacaacgtcactgctaaatgtttcggccacctcacc
aagcagctaatgaagctggcggggggacgtgtggtcctggcgctggaaggaggtcacgac
ctcacggccatctgtgacgcctccgagtcctgcgtggcggccctgctcggcgatgagttg
gaccccctgccacaggctgtcctgcaacagaagccctgtccaaaagctgctgcctctctg
gagagggtcatcgagatacagagtaaacactggagctctctccaaaggttggctcccacg
gtgggccagtccttaatggatgcccagcggagagagaaggacgaggccgacacggtcact
gccatggcatcgcttaccgtggatactgagcaggccgccgcttccaccgtctccacggag
accagcaggtctacagaagagccaatggaagaggagcctgtcttgtag

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