Salvelinus namaycush (lake trout): 120034092
Help
Entry
120034092 CDS
T07522
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like
KO
K03267
peptide chain release factor subunit 3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120034092
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120034092
03012 Translation factors [BR:
snh03012
]
120034092
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
120034092
Translation factors [BR:
snh03012
]
Eukaryotic type
Release factors
120034092
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
LPD34
Motif
Other DBs
NCBI-GeneID:
120034092
NCBI-ProteinID:
XP_038836450
UniProt:
A0A8U0U241
LinkDB
All DBs
Position
41:complement(20134575..20151250)
Genome browser
AA seq
579 aa
AA seq
DB search
MDPRDAAPDSWEQEDDVEAPVDGKLDSEFAALNVNAKPFVPNINAVEFVPSFFQKGPSED
PDSGADVEPVATMEVAETAAPVENGDSEMTTEETWDLKGVEPNDEEPGGGPGGDGGPIVV
EEILEEEVLEEEEEDLPIMPKVVTLPPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGM
VEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAP
GHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIILVN
KMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEPVESCTWYT
GLPFIPHLDSLPNLNRVSDGPVRLPIVDKYKDMGTVILGKLESGSISKAQQLVMMPNRHT
VEVLSLLSDDVETDDASPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVII
EHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTA
GTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVAERD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacgctgcccctgattcatgggaacaagaggatgatgttgaggccccg
gttgacgggaaactcgattctgaattcgccgccctcaacgtgaatgccaaaccgtttgtc
cccaacataaatgccgtcgaatttgtcccgtccttctttcagaaaggcccctcggaagat
cctgattccggtgcggacgttgaaccagttgccaccatggaggtcgcagaaactgcagcc
ccggtggagaacggcgactctgaaatgaccacagaggagacatgggacctgaaaggggtg
gagcccaatgatgaagaaccaggaggagggcctggtggcgacgggggaccaatagttgtt
gaggagattctggaggaggaagtcctagaggaggaggaagaagacttgccaatcatgcct
aaagtggtcaccctcccaccagacgcgcccaagaaggaacatgtgaacgtggtgttcatc
gggcatgttgatgctggcaagtctaccatcggaggtcaaatcatgtatttaacaggcatg
gtggagaagagaactctggagaagtatgaaagagaagccaaggagaagaacagggaaacc
tggtacctctcctgggctctggacactaaccaggaggagcgagacaaggggaagactgtg
gaggtgggcagagcgtactttgaaactgagaaaaagcactttaccatcctggatgcgcca
ggccacaaaagctttgtgcccaatatgatcggaggagcgtcgcaagctgacctggctgtg
ctggtgatctcagccaggaagggagagtttgagacgggctttgagaagggtggacagaca
cgggagcacgccatgttggccaaaacggcgggggtgaagcatctgatcatcctcgtcaac
aaaatggacgaccctacagtgaactggagcctcgagaggtacgaagaatgcaaggaaaaa
ctagtgccatttttgaagaaggttggcttcaaccccaagaaagacattcacttcatgccc
tgctccggcctcacaggagccaacctcaaggagcctgttgagtcgtgcacttggtatacg
gggttaccattcattccacatctggacagtttgccaaacttaaacagagtgagcgacgga
ccagtcagattacccatcgtagacaaatacaaggacatgggtactgtcatcctggggaaa
ctggagtcagggtccatcagtaaagcacagcagcttgtcatgatgccaaacaggcacaca
gtggaggtgttgagcctgctgagtgatgacgtggagacagacgatgcttctcctggagag
aacctgaagctgagactgaagggcatcgaggaggaggagatcctgccaggcttcatcctc
tgtaacgctgagaacctctgccactctggacgcacctttgacgcccagattgtcatcatt
gaacacaagtccattatctgccctggttacaatgctgtcctccacatccacacctgcatc
gaagaagtgcaaattacggccttaatctgtctggtagacaagaagtcgggagagaaaagt
aagacgcgaccgcgctttgtgaaacaggaccaggtgtgcattgcccgtctgcgcaccgcc
ggaaccatctgccttgaaaccttcaaagacttcccccagatgggacggttcaccctacgg
gatgaaggtaagaccattgccattggtaaggtgctgaagctcgttgctgagagggactga
DBGET
integrated database retrieval system
