Salvelinus namaycush (lake trout): 120034105
Help
Entry
120034105 CDS
T07522
Name
(RefSeq) ran GTPase-activating protein 1-like isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120034105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120034105
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
120034105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
Tim54
Nop14
BUD22
CobT
Motif
Other DBs
NCBI-GeneID:
120034105
NCBI-ProteinID:
XP_038836469
UniProt:
A0A8U0U127
LinkDB
All DBs
Position
Sna41:complement(11320838..11326342)
Genome browser
AA seq
569 aa
AA seq
DB search
MATDAVAQLADSLAKTQVTEGELSYKGQGRKFDNAQSVEEMVKEIQEFKGLQALRLEGNT
YGVEAAQAIAKALETKSEFKYCYWSDMFTGRLRSEIPPALNSLGAALMTAGARLTVLDLS
DNAFGPDGVKGIEKLLKSTACHTLQELRLNNCGMGIGGGKILAAALTECYKQSSAQGTPL
GLKVFIAGRNRLENDGATALAQAFQLMGSLEEVHVPQNGINHPGVTALATAMQHNPQLRV
LNLNDNTFTKKGAIAMAQALKHLRSVQVINFGDCLVRSEGAIAIAEAVTEGLPILKELNL
SFGEITGVAALLVAQSVEGKATLEKLDLNGNCLGEEGCDALREVMDGLNMGDLLGSLSDD
EGEPEEEEDDEEDDEEEEEEDDYEEDDDVEEEDSSVNQVSSPPSVPRPPDASSFLCFPSP
DKLLKLGTKRALFFEQQVDVDDAGKTAEAFLKISSVYNEEDEDVKSAVLDSIDAILRKAF
ASPSFQGYNFVSSLLVMLGLLKSEDKVKPVRVVPGHLQALEYVVRQDYFPQDHIAVLEAF
MSRHIQALESCSSARNILKSTLEQVRPEN
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggatgctgttgcacagttggccgactctctggccaaaactcaggtgactgag
ggagagttgagttataaaggccaaggacgcaaattcgacaatgcacaatctgtggaagag
atggtgaaagagatccaggagttcaagggtttgcaagcgctcaggctggaggggaacact
tatggggtggaggcagcacaggccatcgctaaagccctggagacaaagagtgaatttaag
tactgttactggagtgacatgtttactgggcgactgcgttctgagatccctccagccctg
aactccctgggtgcggccctgatgacagcaggcgccagactgaccgtgctggacctcagt
gacaacgcctttggaccagacggggtgaagggcatcgagaagttgctcaagagcactgcc
tgtcacacactgcaggaactgaggctcaacaactgcggcatgggcattggtggaggcaag
atcttagctgcagcgttgacggagtgctataagcagtccagtgcacagggcacccccctc
gggctgaaggtgttcatcgcaggcagaaaccgtctggagaacgatggggccactgccctt
gcccaggccttccagctgatgggtagtctggaggaggtgcacgtgccccagaatgggatc
aaccaccctggagtgactgctctggccactgccatgcaacacaacccccagctccgggtc
ctcaacctcaacgacaacaccttcaccaagaaaggagctatcgccatggcacaggctctg
aaacatttgcgcagtgtccaggtgataaactttggagactgcctggtgcgttccgagggg
gctatagccatcgcagaggcagtcactgaggggcttcccatcctcaaggagctgaatctg
tcattcggggagatcacaggagtagctgcactgctggtggcacaatcagtcgagggcaaa
gccacgctggagaaactggacctaaatggtaactgcctgggggaggagggctgtgatgct
ctcagagaggtaatggatggcctgaacatgggagacctgctgggatcactcagcgacgat
gaaggggagccggaggaggaggaggatgatgaagaggatgatgaagaggaggaggaagag
gatgactatgaggaggatgatgatgtggaggaagaagacagcagcgtgaatcaggtttcc
tcccctccgtcggtgccccgacctccagatgcctcctccttcctctgcttcccatcccct
gacaagctgctcaaactgggcaccaagagggccctgttcttcgaacagcaggtagatgtg
gatgatgctggtaagacagcggaggctttcctgaaaatctcctctgtgtacaatgaggaa
gatgaagatgttaagagtgctgtcctagacagtattgatgcaattctcaggaaagcgttc
gcaagcccctccttccaaggttacaactttgtatcatcactgttagtaatgctgggactc
ctcaagagtgaggacaaggtgaagccggtgcgtgtggtacctggtcatttgcaggccctg
gagtacgtcgtgcgtcaggactacttcccccaggaccacatcgccgtgctggaggccttc
atgtcccgacacatccaggccctggagtcgtgcagcagcgccaggaacatcctcaagtcc
acgctggagcaggtcaggcctgagaactga
DBGET
integrated database retrieval system
