Salvelinus namaycush (lake trout): 120034134
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Entry
120034134 CDS
T07522
Name
(RefSeq) ras-related protein Rab-5C-like
KO
K07889
Ras-related protein Rab-5C
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04137
Mitophagy - animal
snh04144
Endocytosis
snh04145
Phagosome
snh04148
Efferocytosis
snh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120034134
04145 Phagosome
120034134
04137 Mitophagy - animal
120034134
04148 Efferocytosis
120034134
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120034134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120034134
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120034134
04031 GTP-binding proteins [BR:
snh04031
]
120034134
Membrane trafficking [BR:
snh04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
120034134
Endosome - Lysosome transport
120034134
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120034134
Exosomal proteins of other body fluids (saliva and urine)
120034134
Exosomal proteins of colorectal cancer cells
120034134
Exosomal proteins of bladder cancer cells
120034134
GTP-binding proteins [BR:
snh04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
120034134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
120034134
NCBI-ProteinID:
XP_038836505
UniProt:
A0A8U0Q4H0
LinkDB
All DBs
Position
41:complement(6161408..6178485)
Genome browser
AA seq
219 aa
AA seq
DB search
MAGRGGPARTNGAAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPAGGAGGRAGGRAGVDLQEAAPQAGGSKCCGGN
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtcgaggaggaccagcacggaccaacggcgcggcggccagcaacaagatctgc
cagttcaagctggtgctgctgggagagtcagcggtgggcaagtccagcttggtgctgcgg
tttgtcaagggccagttccacgagtaccaggagagcaccatcggagctgccttcctcaca
cagactgtctgcttggatgacacaacagttaagtttgagatctgggacactgcagggcag
gaacggtatcacagcctggcccctatgtactacagaggagcgcaggctgccatcgtggtc
tatgacatcaccaacacagatacattcacacgtgcaaagaactgggtgaaggagctccaa
cgacaagccagccctaacatcgttattgcactggcagggaacaaagctgacctggccaac
aaaagagctgtggacttccaggaagcacaagcgtacgcagatgacaacagtttgctcttc
atggagacttcagccaagacggccatgaacgtcaatgagatctttatggccatagccaag
aagcttcctaagaacgagccagcgggtggagccggtggccgggccggtggtcgggcagga
gtggatctgcaggaagccgccccacaggctggtggtagcaagtgctgtggtgggaactaa
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integrated database retrieval system