KEGG   Salvelinus namaycush (lake trout): 120034134
Entry
120034134         CDS       T07522                                 
Name
(RefSeq) ras-related protein Rab-5C-like
  KO
K07889  Ras-related protein Rab-5C
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04137  Mitophagy - animal
snh04144  Endocytosis
snh04145  Phagosome
snh04148  Efferocytosis
snh05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:snh00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    120034134
   04145 Phagosome
    120034134
   04137 Mitophagy - animal
    120034134
   04148 Efferocytosis
    120034134
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    120034134
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:snh04131]
    120034134
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:snh04147]
    120034134
   04031 GTP-binding proteins [BR:snh04031]
    120034134
Membrane trafficking [BR:snh04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    120034134
 Endosome - Lysosome transport
    120034134
Exosome [BR:snh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120034134
  Exosomal proteins of other body fluids (saliva and urine)
   120034134
  Exosomal proteins of colorectal cancer cells
   120034134
  Exosomal proteins of bladder cancer cells
   120034134
GTP-binding proteins [BR:snh04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    120034134
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 120034134
NCBI-ProteinID: XP_038836505
UniProt: A0A8U0Q4H0
LinkDB
Position
41:complement(6161408..6178485)
AA seq 219 aa
MAGRGGPARTNGAAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPAGGAGGRAGGRAGVDLQEAAPQAGGSKCCGGN
NT seq 660 nt   +upstreamnt  +downstreamnt
atggcaggtcgaggaggaccagcacggaccaacggcgcggcggccagcaacaagatctgc
cagttcaagctggtgctgctgggagagtcagcggtgggcaagtccagcttggtgctgcgg
tttgtcaagggccagttccacgagtaccaggagagcaccatcggagctgccttcctcaca
cagactgtctgcttggatgacacaacagttaagtttgagatctgggacactgcagggcag
gaacggtatcacagcctggcccctatgtactacagaggagcgcaggctgccatcgtggtc
tatgacatcaccaacacagatacattcacacgtgcaaagaactgggtgaaggagctccaa
cgacaagccagccctaacatcgttattgcactggcagggaacaaagctgacctggccaac
aaaagagctgtggacttccaggaagcacaagcgtacgcagatgacaacagtttgctcttc
atggagacttcagccaagacggccatgaacgtcaatgagatctttatggccatagccaag
aagcttcctaagaacgagccagcgggtggagccggtggccgggccggtggtcgggcagga
gtggatctgcaggaagccgccccacaggctggtggtagcaagtgctgtggtgggaactaa

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