Salvelinus namaycush (lake trout): 120034150
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Entry
120034150 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04120
Ubiquitin mediated proteolysis
snh04137
Mitophagy - animal
snh04144
Endocytosis
snh04340
Hedgehog signaling pathway
snh04350
TGF-beta signaling pathway
snh04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120034150
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120034150
04350 TGF-beta signaling pathway
120034150
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120034150
04137 Mitophagy - animal
120034150
09144 Cellular community - eukaryotes
04520 Adherens junction
120034150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120034150
04121 Ubiquitin system [BR:
snh04121
]
120034150
03029 Mitochondrial biogenesis [BR:
snh03029
]
120034150
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120034150
Membrane trafficking [BR:
snh04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
120034150
Autophagy
Mitophagy
Other mitophagy associated proteins
120034150
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
HECT type E3
120034150
Mitochondrial biogenesis [BR:
snh03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
120034150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
120034150
NCBI-ProteinID:
XP_038836524
UniProt:
A0A8U0Q722
LinkDB
All DBs
Position
Sna41:complement(13546132..13600905)
Genome browser
AA seq
772 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLVKKDFFRLPDPFAKVVVDGSGQCHSTDTVKNTLDPK
WNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDMNKL
GLNDSDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPGRPLSCIVDENTPILSTNGATPTIPCVPSSDQRAQERRVRSQ
RHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEEL
GPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPSPNGSRSGIEIQNSSI
SRQNQLKEQAQQALVSPGNLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGHCRIE
VSREEIFEESYRQVMKMRPKDLWKRLMVKFKGEEGLDYGGVAREWLYLLSHEMLNPYYGL
FQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKP
ITLDDMESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKIIQVTQD
TKKEYVRLYVNWRFLRGIEAQFLALQKGFNEVISQHLLKAFDEKELELIVCGLGKIDIND
WKSNTRLKHCTTDTNIVKWFWKAVESYDEERRARLLQFVTGSSRVPLQGFKALQGAAGPR
LFTIHQIDASSNNLPKAHTCFNRVDIPPYENYDKLYDKLLTAIEETCGFAVE
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaaggagttcggcgaaatggtccggttaaactgcgtttaacagtcctctgt
gccaaaaacctggtgaagaaagatttctttcgcctccctgatccctttgccaaagtggtg
gtggacggctcaggacaatgtcactccacagacaccgtgaagaacaccctcgaccccaag
tggaaccagcactacgacctatatattggcaagtctgactccatcaccatcagcgtgtgg
aaccacaagaagatccataagaagcagggggctggcttcctgggctgtgtacgccttcta
tccaacgccatcaaccgcctcaaagacaccggctatcagagattggacatgaacaagctg
ggcctcaatgacagtgacacagtgaggggtcagatagtggtgagcctgcagtccagagac
aggataggcacaggaggcccagtggtggactgcagccgtctgtttgacaatgacctgcca
gacggctgggaggagcggaggactgcgtctggccgaatccagtacttgaaccacatcaca
cgcaccacacagtgggagaggcctaccaggcctgcgtcggagtactccagcccgggccgg
cctctcagctgcatcgtggatgagaacacgcccatcctgagcaccaacggggccacgccc
accattccgtgtgtcccgtccagcgaccagcgggcccaggagagacgcgtccgctcccag
agacacaggaactacatgagcaggacacacctccacacacccccagacctgcctgaggga
tacgagcagaggaccacgcagcagggccaggtctacttcctccacacccagacaggagtc
agcacatggcacgaccctcgagtgcccagagacctgagtaatgtaaactgtgaggagctg
ggcccactgccccctggctgggagatcaggaacacagccaccggccgggtctacttcgtg
gaccacaacaaccgcactacgcagttcacagacccgcgcctctccgccaacctgcatcta
gtccttaacccaagccccaatggttcccgcagcggcatcgaaattcagaacagttcgatc
agccgtcagaaccagctgaaggagcaggcccagcaggcactggtgtctccaggtaatctg
ccagaggaggccgagtgcctcacggtgcccaagtacaagagggacctggtgcagaagctg
aagatcctccgccaggagctgtcccagcagcagccccaggcaggccactgccgcatagag
gtgtcccgcgaggagatctttgaggagtcttaccgccaggtgatgaagatgaggccgaag
gacctgtggaagagactgatggtgaagtttaaaggggaggaggggctggactacggagga
gtggccagggagtggctgtatctgctgtcccatgagatgctgaatccgtactacggcctg
ttccagtactcccgcgatgacatctacaccctgcagattaaccccgactcagccgtcaac
ccggaacacctgtcctacttccactttgtgggtcgtatcatgggcatggcggtgttccac
ggccactacatagacgggggcttcaccctgcccttctacaaacagctgctggggaaaccc
atcaccctggacgacatggagtcagtggacccagacctccacaacagcctggtctggatc
ctggacaatgacatcacaggcgtgttggaccacaccttctgtgtggagcacaatgcctac
ggggagatcatccagcacgaactcaaacccaacggcaaaatcatccaggtcacccaggac
accaagaaggagtatgtcaggctgtatgtgaactggcgtttcctgcgaggcatcgaggct
cagttcctggccctgcagaagggcttcaacgaggtcatctcccagcacctcctcaaggcc
ttcgacgagaaagagctggagctcatagtgtgtggcctgggtaagatcgacatcaacgac
tggaagtccaacacgcggctgaagcactgcaccaccgacaccaacatcgtcaagtggttc
tggaaggccgtggagtcgtacgatgaggagcgccgggccaggttgctgcagtttgtcact
ggctcctccagggtccccctgcaaggcttcaaagccctccaaggtgctgcaggcccacga
ctcttcaccatccaccagatcgatgccagctccaacaacctgcccaaagcccacacctgc
ttcaaccgggtcgacattcctccctacgagaactatgacaagctgtatgacaagctgctc
actgctatcgaggagacgtgtggctttgctgtggagtga
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