Salvelinus namaycush (lake trout): 120034164
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Entry
120034164 CDS
T07522
Name
(RefSeq) protein Tob2-like
KO
K14443
protein Tob/BTG
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120034164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120034164
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120034164
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
120034164
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
PAM2
Ribosomal_L9_N
Motif
Other DBs
NCBI-GeneID:
120034164
NCBI-ProteinID:
XP_038836542
UniProt:
A0A8U0Q5U7
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Position
Sna41:complement(11375599..11382734)
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AA seq
405 aa
AA seq
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MHLEVKVALNFIVSYLYNKLPRRRADLFGEELEQILLSHYEGHWYPEAPLRGSAFRCLHL
GAPRDPVVELAARRSGLDTEEVRANVPPELSVWIDPYEVSYQIGEKGAVKVLYLEDPSGL
GGEGEMVEVVSGVSIGDMEIEEAKSLGFNPEAQVFVPIGAQISPVLLPSLSSSPTPLSAS
SCPVIFSYPSSSTPTNPTAHSSNTSTPSPPSGGLPYLPSQQPTAALPSTRPPLQPITFTT
ASFAATKFGSTKMKKCGGSGSAGGSGVGVPPPQRILSRSPTNISPPGLLKHKPLSVSLHS
LGAQIPSQLSPNAKEFVYPTSPGPLYFDNDAPLILSHSSPFQHPHPTHSHPSFDPFSSPP
PGPAVGTIGGSGGISYIEKPSFVEGVGGYNLQYPSQAFQPVVLAN
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcacctagaggtaaaggtagctctgaatttcattgtgtcctacctgtacaacaaactg
ccccgtcgtcgtgctgacctcttcggggaggagttggagcagatactgttgtcgcactat
gaaggccactggtatcctgaagctcctctgcggggctctgccttccgctgcttgcaccta
ggggcccccagggacccagtggtggagctagctgccaggagaagtggactggacacagag
gaagtgcgtgccaatgtcccccctgagctgagtgtgtggatcgacccctatgaggtgtcc
taccaaatcggggagaagggagccgttaaggtcctgtacttggaggatccatccggctta
ggtggggaaggcgaaatggtggaagtagtaagtggagtgagtataggggacatggagata
gaggaggccaagagcttagggttcaaccctgaggcccaggtgtttgttccaattggagcc
cagatatctccagttctgcttccttccctctccagctcacccacacccctctcggcttca
tcctgcccagtgattttcagctatcccagctccagcacacccacgaacccaactgcccac
tcctctaacacatccacaccttcccctccaagtgggggactcccttacctcccctctcag
cagccaacggctgcccttcccagcacccgtccaccgctgcagcccatcaccttcaccacg
gccagtttcgccgccacaaaatttggctccaccaagatgaagaagtgtggcggttccgga
tcggctggcggctcgggtgtaggcgtgcccccgccacagaggatcctctcccgttccccc
accaacatctctcccccagggctgctaaaacacaagcccctctcagtctccctgcactcc
ctgggggctcagatccccagccagctctcccccaatgctaaagagtttgtttacccgaca
tccccagggcccctatactttgacaacgatgcgccgcttatactttcacactcaagcccc
ttccagcaccctcaccccacccactcccacccctcctttgacccattctccagcccccca
cctggtccagctgttggcaccattggtggtagcggtgggatttcttacattgagaagccc
tcatttgtagagggtgtaggggggtataacctgcaatatcccagccaggccttccagccg
gtggtgctggccaactaa
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