Salvelinus namaycush (lake trout): 120034165
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Entry
120034165 CDS
T07522
Name
(RefSeq) xylosyltransferase 2-like
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
snh00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
snh01100
Metabolic pathways
Module
snh_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
120034165
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
120034165
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snh01003
]
120034165
Enzymes [BR:
snh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
120034165
Glycosyltransferases [BR:
snh01003
]
O-Glycan biosynthesis
Glycosaminoglycan
120034165
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Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
120034165
NCBI-ProteinID:
XP_038836543
UniProt:
A0A8U0Q4Z3
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Position
Sna41:complement(12834073..12847810)
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AA seq
877 aa
AA seq
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MVASVRVQKLLRRYKLAIAAALTILLIQGLVVWSLRSLEEGEAERKTRRSKLPDHNSQDP
KREVVAWERKNALSVRSGARWSSRLESTGATAASALRRGTKRRGKHTIRVKVPLGQGVAV
DGVPPHDPSSSRNFTDTRSGGEGAARLPPPVMPGEPGSVEGAPQAPSSDFVPKCDIMGKD
ALSALHRAGSRQCRQEIANIVCQHQAGQLMPRVLPQFCPLHGFSSPVQTADELDNDLSKV
ENPVRVAFVLVVHGRAIRQLKRLIKAIYHRDHFYYIHVDKRSNYLHREVQQIAQQYPNVR
ATPWRMVTIWGGASLLKAYLRSMQDLLSMLDWNWDFFINLSATDFPTRTNDELVAFLSQH
RDQNFLKSHGRENARFIKKQGLDRLFHECDNHMWRLGERTIPEGLEVSGGSDWFSLTRRF
VEYVINSQDELVAGLKQFYTYALLPAESFFHTVLGNSHMCDSLVDNNLRVTNWNRKLGCK
CQYKHIVDWCGCSPNDFKPQDLVRIQQLTRPTFFARKFESTVNQEAIDILDTHLYGHYAP
GTVAIKAYWESLFELVDGVGSLSDVALTAYSSFFRLGLRSLDSSQTSLETCRYEPIGYPV
SVHLYFYDERFQGYLVRQEVQKVGSRVRETVEVWAVPQATMQLENNLREFERLKNLEVGT
EWDPKERIFRNFGGVIGPLDELVAVQKWVRGPNLTATIVWIDPAQTVAASYDISVDVDTE
YTQYKPPLQRPLRPGAWTVRVLRLWERVAEARFLVMPLAFKGREPLRQEEDSWLHAGPPG
NLYLEQGFQQLRSVLKLPPQEPALQEAQQRAQLVGKPLEAWVDRTVGAFWVTGDLCSTLP
SPGPCPSLGPCTKSTWSSLAPDPKSELGPVKGDGRIR
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggtggccagcgtcagagtgcagaagctcctccgacgatacaaactagcgattgccgcc
gcgttaacgattcttctgattcaagggctagtagtatggagtctgagaagtctcgaagag
ggcgaggcggagaggaaaacacggcggtctaagctacctgaccacaacagccaggacccc
aaaagggaggtggtggcctgggagagaaagaacgccttgtctgtgaggagcggggcccga
tggagcagcaggctggagagtacgggggccacggccgccagcgccctccggaggggcacc
aagcgccgggggaagcataccatcagggtgaaggtgcccctgggccagggggtagcagtt
gatggcgttcccccccatgacccctccagcagccgtaacttcactgatacccggagtgga
ggggagggggcggccagactaccccctccagtcatgccaggggaaccgggcagcgtggag
ggggcgccccaagcgcccagcagcgactttgtgcccaagtgtgacatcatgggcaaggac
gccctgtcggccctgcaccgcgctggctctcggcagtgccgccaggagatcgccaacatt
gtgtgccagcatcaggccgggcagctcatgccaagggtactgcctcagttctgcccgctg
cacggtttttccagcccggtccagacagctgatgagctggacaatgacctgtccaaggtg
gagaacccggtcagggtggccttcgtcctggtggtccacggccgggccatcaggcagctc
aaacgcctcatcaaagccatataccaccgagaccacttctactacatccacgtggacaag
cgttccaactacttgcatcgggaggtgcagcagattgcccagcagtaccccaatgtgcgt
gccacgccctggcgcatggtgaccatctggggcggtgccagcctgctgaaggcctacctg
cgcagcatgcaggacctgctctccatgctggactggaattgggacttcttcatcaacctc
agtgccactgacttccccaccaggaccaacgatgaactggtggcttttctgtcacagcac
agagaccagaacttcctcaagtcacatgggcgggagaacgcgaggttcataaagaaacag
ggtctggaccggctgttccatgagtgtgacaaccacatgtggcggctgggtgagcggacc
atcccagagggcctggaggtgtctgggggctctgactggttctccctcaccaggcgcttc
gtagagtatgtcatcaactcccaggatgagctggtggcgggcctgaaacagttctacacc
tacgccctgctccccgctgagtccttcttccacacagtgctggggaacagtcacatgtgt
gactctctggtggacaacaacctgcgtgttaccaactggaacaggaagctgggctgtaag
tgccagtacaaacacatagtggactggtgcggctgctctcccaatgacttcaaaccacag
gacctcgtcaggatacagcaactgacccggcccacgttctttgcccgaaagtttgagtcc
acggtgaaccaagaggctatagacatcctggacacccacctgtatggacactacgcccca
gggacggtggccatcaaggcctactgggagagcctgtttgagctggtggacggggtgggc
tccctcagtgacgtggccctcacggcctactcttccttcttccgcctgggcctcaggagc
ctggatagcagccagaccagcctggagacctgcaggtatgagccaataggctacccggtg
tcggtgcacctgtatttctacgacgagcgtttccagggctacttggtccgtcaggaggtg
cagaaggtggggtcaagggtcagggaaacggtggaggtgtgggccgtgcctcaggccacc
atgcagctggagaacaacctcagggagtttgagaggctcaagaacctggaggtgggcaca
gagtgggaccccaaggagagaatcttccggaacttcggcggtgtgatcgggccgctggac
gagctggtggcggtacagaaatgggttcgggggcccaacctcactgccaccattgtgtgg
atcgaccctgcccagacggtggcggcgtcttatgacatcagtgtggatgtggacacagag
tacacgcagtacaagcccccgctgcagcggccgctccggcccggggcctggacagtcagg
gtgctgaggctgtgggagcgcgtggctgaggctcgcttcctcgtcatgcccctggccttc
aaaggacgagagccactacgccaagaggaggacagctggctgcacgcggggccaccaggc
aacctgtacctggagcagggcttccagcagctgagatctgttctgaagcttcccccacag
gagcccgccctgcaggaggcccagcagagggcccagctggtgggcaagcccctggaagcc
tgggtggaccgcaccgtgggggccttctgggtgaccggggacctgtgctccaccctgccc
tccccgggcccctgcccttcccttggcccctgtaccaagtccacctggagctccctcgcc
ccagaccctaagtcagaacttggccctgtcaaaggtgacggccggatcaggtag
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