Salvelinus namaycush (lake trout): 120034238
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Entry
120034238 CDS
T07522
Name
(RefSeq) speckle-type POZ protein-like
KO
K10523
speckle-type POZ protein
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120034238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120034238
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
120034238
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GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BACK
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
120034238
NCBI-ProteinID:
XP_038836649
UniProt:
A0A8U0U188
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Position
Sna41:complement(21355942..21463043)
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AA seq
374 aa
AA seq
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MSRVPSPPPPADMSSGPVAESWCYTQIKVVKFSYMWTINNFSFCREEMGEVIKSSTFSSG
ANDKLKWCLRVNPKGLDEESKDYLSLYLLLVSCPKSEVRAKFKFSILNAKGEETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPEDKLTLFCEVSVVQDSVNISGQNTMNMVK
VPDCRLADELGGLWEHSRFTDCSLCVAGQEFQAHKAILAARSPVFSAMFEHEMEESKKNR
VEINDVEPEVFKEMMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCTSLSVE
NTAEILILADLHSADQLKTQAVDFINYHAAEVMETSGWKSMVASHPHLVAEAYRSLASAQ
CPFLGPPRKRLKQS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagagtcccgagtccccctccccccgcggacatgtccagcggccctgtggctgag
agctggtgttacactcagatcaaagtggtgaagttctcttacatgtggaccatcaacaac
ttcagcttctgtcgtgaggagatgggtgaggtcatcaagagctccaccttctcttcggga
gccaatgacaagcttaaatggtgtttgcgtgtaaaccctaaaggcctggacgaggagagt
aaagactacctgtccctctacctgctcctggtcagctgtcccaagagcgaggtgcgtgcc
aagttcaagttctccatcctcaatgccaagggagaggagactaaggctatggagagccag
agggcataccggtttgtccaggggaaggactggggctttaagaaattcatcaggagagac
tttctgctggacgaggccaatgggctgctgcctgaggacaagctcactctcttctgtgag
gtgagtgtggtgcaggactctgtgaacatctcaggtcagaacactatgaacatggtgaag
gtgccagactgcaggctggccgatgagctgggagggctgtgggaacactcccgctttact
gactgctccctgtgtgtggcgggacaggagttccaggcacacaaagccatcctggcagcc
cgatcgccagtgttcagtgccatgtttgagcacgagatggaggagagtaaaaagaaccgt
gtggagatcaacgatgtggagcccgaggtgttcaaggagatgatgtgcttcatctacaca
ggcaaagcccccaacctggacaagatggctgacgacctgctggctgcggctgacaagtat
gccctggagaggctgaaggtgatgtgtgaggatgctctgtgcaccagtctgtctgtggag
aacactgcagagatcctcatcctggcagacctgcacagtgcagaccaactcaaaacacag
gccgtggacttcatcaactaccatgctgctgaggtgatggagacgtctggctggaagtcc
atggtggcatcccacccccacctggtggctgaggcctatcgctccctggcctcggcccag
tgccccttcctgggacccccacgcaaacgactcaaacagtcctag
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