Salvelinus namaycush (lake trout): 120034327
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Entry
120034327 CDS
T07522
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120034327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120034327
03036 Chromosome and associated proteins [BR:
snh03036
]
120034327
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120034327
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120034327
PBAF complex
120034327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
GCN5L1
Sarcoglycan_2
Motif
Other DBs
NCBI-GeneID:
120034327
NCBI-ProteinID:
XP_038836768
UniProt:
A0A8U0Q5F3
LinkDB
All DBs
Position
Sna41:10518544..10526642
Genome browser
AA seq
437 aa
AA seq
DB search
MSKRPSYAPPPTPAPTTQVPNTPGFVGYNPYSHLAYNNYRLGGNTGSNNRVMNSSGITVP
KPPKPPDKPLMPYMRYSRKVSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTEEEKQDYL
NEYEAEKIEYNDSLKAYHNSPAYLAYINAKNRAEAALEEESRQRQTRVEKGEPYMSIQPA
EDPDDYDDGFSMKHTATARFQRNHRLISDILSEIVVPDVRSVVTTARMQVLKRQVQSLMV
HQRKLEAELLQIEDRHQDKKRRFLETTDSFNSELKRLCGQKVEVDMEKLAVEIAAAEEAA
RRRAEEREKEAAEQAEKAAQEQQEQQQAAAASTSSTLPITEQNNTTPPTAETKEDQGKPT
PMETEETPASETSETQPEAEEGTPAAEKQQGPPVESVTDEGTSDSTAPSESSTGPPADPP
ASAEPAPEERPASQPSQ
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaaggccatcatatgcacctccccccaccccagcccccacaactcaagtgccc
aacacccctgggtttgtggggtacaacccatacagccatctggcctacaacaactacagg
ctgggagggaataccggcagcaacaacagggtaatgaattcctcaggaatcactgttccc
aagccgcccaaaccgccagacaagccgctgatgccctacatgcggtacagccggaaggta
agcaggaaggtctgggaccaagtcaaagcctccaatccagatctgaagttatgggagatt
ggaaagattattggtggcatgtggagggacctcactgaagaggagaagcaggactacttg
aacgaatatgaagcggaaaagattgagtacaacgactccctgaaggcctaccacaactca
ccggcttacctggcctacatcaacgccaagaaccgtgcagaggcggctctggaggaggag
agcagacagcggcagacccgcgttgagaagggagaaccttacatgagcatccagcctgct
gaagacccagatgactatgatgatgggttctccatgaagcacacggccaccgctcgcttc
cagaggaaccaccggctcatcagtgacatccttagtgagattgtggtgccagatgtgcgc
tctgtcgtcaccactgcacgcatgcaagtcctcaagcgccaggtccagtccctcatggtg
caccagaggaagctggaagcagagctgctgcaaatagaggaccggcaccaggacaagaag
aggaggttcctggagactacagactccttcaacagtgagctcaaacgactgtgcggtcag
aaggtggaggtagacatggagaagctggcagtagagattgctgcggcagaggaagctgct
aggcggcgggcggaggagagggagaaggaagcggcggagcaggcagagaaggctgcccag
gaacagcaagagcagcagcaggcagcagcggcctccacttcgtctaccctgcccatcact
gaacagaacaacaccaccccaccaaccgcagagaccaaggaggaccagggcaagccaacc
cctatggagacagaagagactcctgcatcagagacatctgagacccagcctgaggctgag
gagggcacacctgctgcagagaagcagcagggcccgccggtggagagcgtcacggacgag
ggcaccagtgacagcaccgccccatccgaaagcagcaccggacctcctgcagacccccct
gcttcagctgagcctgccccagaggaacgcccagccagccagccctcccaataa
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integrated database retrieval system
