Salvelinus namaycush (lake trout): 120034343
Help
Entry
120034343 CDS
T07522
Name
(RefSeq) procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00310
Lysine degradation
snh00514
Other types of O-glycan biosynthesis
snh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120034343
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120034343
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snh01003
]
120034343
Enzymes [BR:
snh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
120034343
Glycosyltransferases [BR:
snh01003
]
O-Glycan biosynthesis
O-linked Gal type
120034343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
CAP59_mtransfer
Motif
Other DBs
NCBI-GeneID:
120034343
NCBI-ProteinID:
XP_038836794
UniProt:
A0A8U0Q7L2
LinkDB
All DBs
Position
Sna3:complement(61595029..61635730)
Genome browser
AA seq
609 aa
AA seq
DB search
MHGYNFLLSTALTILFSGPARGYFPEERWSPESPLLAPRVFIALVCRNSEHSLPYFLGNI
ERLNYPKDRVAIWVATDHNVDNTTAILRDWLVKVQKLYHYVEWRPQEEPTEYQDADSPKQ
WTNLRYAHVMKLRQAALDSARDMWADYFMVADCDNLLTNPNVLWKLIKEKKTIVAPMLES
RAAYSNFWCGMTSQGYYKRTPAYIPMRKQVRKGCFAVPMVHSTFLIDLRKEASRQLAFHP
PHPDYSWAFDDIIVFAFSAHMADVQMFLCNRETYGYFPVPLRAHNSLTDEAESFLHSLLE
VNVRNPHVLPSEYIPAPIKIQDKLGFDEVFMINLKKRTDRRDRMLRTLYEQEIACKVIQA
VDGKAMNISEINALGIHMLPGYSDPYHGRPLTKGELGCFLSHYNIWKEIAERGLKSSLVI
EDDLRFEVFFKRRLMNLMSEVESQGLDWDLIYIGRKRMQVDRPEKSVPNIHNLVEADYSY
WTLGYMMSLQGAQKLLRAEPLKRILPVDEFLPVMFNKHPVSDYMEQFEERDLKAFSAEPL
LVFPTHYTGDAGYISDTETSVVWDNEKVRTDWDRARSGKTQEQAEISSEAQNSDVLQSPL
DSTATRDEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggtacaacttccttctgtccaccgccctgacgatactgttctccggaccagct
cgaggatacttccccgaagagcgctggagccccgaatctccacttcttgccccgcgggtc
ttcattgccctcgtctgccgcaactctgaacattctctgccttatttccttggaaatatc
gaacgtctgaattatcccaaggaccgcgtggcaatttgggtagcgacggaccacaatgtg
gacaacactacagccatcctgcgtgactggctcgtcaaggtccaaaaactgtaccactat
gtggagtggaggccgcaggaggagcccacagagtaccaggatgcagacagcccgaagcag
tggaccaacctccgctatgcacacgtgatgaagctacggcaggcagcactggactccgca
agagacatgtgggcagactacttcatggtggcggactgtgataacctattgaccaatcct
aatgtactgtggaagctcatcaaggagaagaagaccatcgtagctcccatgttagagtcc
cgtgcagcctactccaacttctggtgtggcatgacctcccagggttactataagcgcacc
ccggcctacatccctatgagaaagcaggtgcgtaaaggatgctttgcggttcccatggtg
cactccacattcctgattgacttgaggaaggaggcgtcacgccagctggccttccacccc
cctcacccagactacagctgggccttcgatgacatcattgtcttcgccttctccgctcac
atggcagatgtgcagatgttcctatgtaacagagagacttatgggtatttccccgtgcca
ctgcgagcccacaactccctgacagacgaagcagagagcttcctacattccttgttggag
gtcaatgtgcggaaccctcatgtgctgccctcggagtacatcccggcccccataaagata
caagataaactgggctttgatgaggtgttcatgatcaacctaaagaaacggaccgaccgg
cgggatcgcatgctgaggactctgtacgagcaagagattgcctgcaaggtcattcaagcg
gtggacggcaaagcgatgaacatcagtgagatcaatgccctggggatccacatgctacca
ggctacagtgatccgtatcacggcaggcccctcactaagggagagctgggctgcttcctc
tcacactacaacatctggaaagagatcgcagagcggggtctaaagagttccctggtgatc
gaggacgatctgcgtttcgaggtcttcttcaagcgacgcctgatgaacctgatgagtgaa
gtggagagccagggtctagactgggacctgatttatatcggcaggaagaggatgcaggtg
gaccgccctgagaagtccgtgcccaatatacacaacctggtggaggccgactactcctat
tggacgctgggctatatgatgtcattacaaggagcccagaagctgctgagggcagagccg
ttgaagaggatattacccgtagatgagttcctccctgtcatgttcaataagcaccctgtc
tcggactacatggagcagtttgaggagcgagacctgaaggccttctcggccgagcctctg
ctagtgttccccactcactacacaggagacgcgggctacatcagcgacacagagacctcc
gtggtgtgggacaacgagaaggtgcgtacggactgggaccgggcccgctcggggaagaca
caggagcaggcggagatcagcagcgaggcccagaactctgacgtactccagtcacctctg
gacagcacagccacacgggacgaactatga
DBGET
integrated database retrieval system
