Salvelinus namaycush (lake trout): 120034359
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Entry
120034359 CDS
T07522
Name
(RefSeq) glial fibrillary acidic protein-like
KO
K05640
glial fibrillary acidic protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120034359
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120034359
Membrane trafficking [BR:
snh04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
120034359
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
120034359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF7491
TolA_bind_tri
TPR_MLP1_2
DUF1664
BLOC1_2
T2SSF
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
120034359
NCBI-ProteinID:
XP_038836808
UniProt:
A0A8U0U212
LinkDB
All DBs
Position
Sna41:21616868..21623540
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AA seq
457 aa
AA seq
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MESQRVLSSYRKRFGPQGAGSVGGGVRLSSLSSSRFSLHGSPRHLTHSSTISRLSLGSAG
GALLLGTPGNRLDFSADSLLKAQYRETRTNEKVEMMGLNDRFASFIEKVRFLEQQNTVLV
TELNQLRGKEPSRLGDIFQEELMELRRQVDGLSAGKARLEIERDNMAADVAMLKQRLQDE
MVLRQDAEGNLNAFRQDVDEASLNRVQLERKIDALQDEIAFLKKIHEEELRELQEQLMAQ
QVHVDVDVSKPDLTAALRDIRVQYESVASSNIQETEEWYRSKFADLTDAATRNADALRLA
KQEGNEYRRQLQAMTCDVEALRGTNESLEQQLREMEDRFSVETAGYQDTVGHLEEEIQTL
KEGMARHLQEYQELLNVKLALDIEIATYRKLLEGEESRITVPMQSFSNLQFRETSMDTKF
SPEAHVKRSIIVRTVETRDGEIIKESTAERKEIPDSP
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggagagtcagagagtcctgtcgtcttacaggaagcgtttcgggccccagggggccggc
agtgtgggtgggggcgtgcggctcagcagtctctcctccagccgcttctccctccatggg
agtccccgccacctgacccactccagcaccatttcccgtctctccctggggtcggctgga
ggggccctgctcctggggacccctgggaaccggctggacttctcggctgactcactcctc
aaggcccaataccgggagacacgcaccaacgagaaggtggagatgatgggtctgaacgac
cgcttcgccagctttatagagaaggtgcgcttcctggagcagcagaacacggtgctggtg
acggagctgaaccaactgagggggaaggagcccagccgtctgggagacatcttccaggag
gagctgatggagctgcgcaggcaggtggatggactcagcgctgggaaggcccggctggag
atagagagggacaacatggctgctgacgtggccatgctcaaacagagactgcaagatgag
atggttcttagacaggatgcagagggcaacttgaacgcctttagacaggacgtggatgag
gcgtctctgaaccgtgtccagttggagaggaagatagacgcgctgcaggatgagattgcc
ttcctcaagaagatccacgaggaggagctgcgtgagctgcaggagcagctgatggcccag
caggtccatgtggatgtggacgtgtccaagccagacctgaccgctgctctgagggacatc
cgggtccagtatgaatccgtggcctcctcgaacattcaggagacggaggagtggtaccgc
tccaagtttgccgacttgactgacgcagctactcggaatgcagacgccttgcgattggcc
aaacaggagggcaacgagtaccgccggcagctccaggccatgacctgtgatgtggaggcg
ctccgtggaacaaatgagtctctggagcagcagctgcgcgagatggaggaccgtttctcc
gtggagactgctggttaccaggatacagtgggtcatctggaggaggagatccagactctg
aaggaagggatggccagacacctgcaggagtaccaggaactgctcaacgtcaaactggcc
ctggacatagagatcgctacctacaggaagctgctggagggagaggagagcaggatcact
gttccaatgcagagcttctccaacctgcagttcagagagaccagtatggacactaagttc
tctccagaggcccatgtcaagagaagcatcatagtgcggactgtggagactagagacggg
gagatcattaaggagtctacagctgagaggaaggagattcctgacagtccttaa
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