Salvelinus namaycush (lake trout): 120034421
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Entry
120034421 CDS
T07522
Name
(RefSeq) interferon alpha-6-like
KO
K05414
interferon alpha
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04060
Cytokine-cytokine receptor interaction
snh04217
Necroptosis
snh04620
Toll-like receptor signaling pathway
snh04621
NOD-like receptor signaling pathway
snh04622
RIG-I-like receptor signaling pathway
snh04623
Cytosolic DNA-sensing pathway
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120034421
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120034421
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120034421
04621 NOD-like receptor signaling pathway
120034421
04622 RIG-I-like receptor signaling pathway
120034421
04623 Cytosolic DNA-sensing pathway
120034421
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120034421
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
snh04052
]
120034421
Cytokines and neuropeptides [BR:
snh04052
]
Cytokines
Interferons
120034421
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Gene cluster
GFIT
Motif
Pfam:
Interferon
Motif
Other DBs
NCBI-GeneID:
120034421
NCBI-ProteinID:
XP_038836900
UniProt:
A0A8U0U2I0
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Position
Sna41:2191794..2192959
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AA seq
187 aa
AA seq
DB search
MAIQTITWMSAFLCLVQVFSMPMPCQLQGQLVRTTHNLLRDMGGHFPLECLQENVVMSFP
ATAFATSGAPQLSSSGAKAIYETLKNIDTLFGTDEMPTMWDQQKLEYFQNIIYRQTEESK
CMMSSVDTSDYPIRAEGLKTYFGNIAAVLTEKNFSYCAWEVVRKELLYTLEFILKHNSDS
LLWSNRT
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggcaattcagactatcacttggatgagcgccttcctctgcctcgtgcaagttttctcg
atgcccatgccttgccagctacaaggacagctggtgcgaacaacccacaacctactgaga
gacatggggggtcattttcctctagagtgcctgcaggagaatgtcgtcatgtcattccca
gccacggcatttgcaacctccggcgcgccacagttgagcagcagtggtgcgaaggcaatt
tatgagacattgaagaacatcgacacattgtttggaaccgacgaaatgccgacgatgtgg
gaccaacagaagttggagtattttcagaacattatctaccgtcagactgaagagagcaaa
tgtatgatgagcagtgtggatacaagtgattatcccatcagggcagagggcctgaagacg
tactttgggaacattgcagcagtcctaacagaaaagaatttcagttactgcgcctgggaa
gtggttcgaaaagagctcctgtacaccctagaattcattctgaaacacaactctgatagc
cttctgtggtccaacagaacatga
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