Salvelinus namaycush (lake trout): 120034467
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Entry
120034467 CDS
T07522
Name
(RefSeq) rho GTPase-activating protein 27-like isoform X1
KO
K20636
Rho GTPase-activating protein 12/27
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120034467
Membrane trafficking [BR:
snh04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
120034467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
WW
PH
SH3_1
PH_9
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
120034467
NCBI-ProteinID:
XP_038836968
UniProt:
A0A8U0Q4K1
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All DBs
Position
41:10544255..10567645
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AA seq
1046 aa
AA seq
DB search
MSSLVCNMGLVLVEFEYEYMGRDGGLVSIKPNERYILLAKTNDHWWHVRKNEQARPFYIP
AKYVKELPAEFPSPLDFADPPSPDLVPIPVPAPVPVPVPKHSVPDRAETRVGDEVTIRLR
SPKRHQKTEHRMSTFGVPLEFHNPSPGALKRGGLNDSLPGLHSYVALEVPLTVPSPQANN
SAKHKKQLSLSSSVLFGSSLSVEESLSLNPRAPSFSPADPLHRPSQAIPVETSIIPDAEV
TGGRIPHQEPLKEPECPLELEEGEKEKSSVEPEDESKEDTENIYESILDLKLDESPIIVE
KTPTVSPAAVAEPTPVIAPTSPSPTQTQVENASPNTAVYANVTELKKNIPQSPPLVALSP
DLPLTQEGWQVHTDKDSGKEFYYRPATGQTTWADPRSTLPSTDMELPKEALAVPALSMAL
SPALSPALSPALSPASSQGSNWEQVLDETTGRNYFYNPTSGATSWGAPEPIAPSSPVTEP
PMLKLPDRGPPPLPKEDYLTEDHEAPDTSSSVFPKDLLPMPQAKQAVIPRATLDSVPVGW
KRSMDADGKTVFTSERTQEQWLKSVDQEGKTYYYLRDGSRSQWNLPAELPVASSLPKVRN
GVDQDSPPVLKNWRHTIGPAQFGPSQEDNRFFPTHRRNVSDITSEASSSGNSPETPHHTH
LLEKAGILNKTKVADNGKRIRKNWSPSWTVLHGGILTFHKDPKYAPSGNSNKTNQITPEY
TVELRGATVGWAPKDKSSKKNVLELKTRHGCEYLIQYDTESIICDWHRIILDTVRQLDQD
HLSEEEEEEPMEKSPLASDRDKRTSSATKITPGISAESSDQGRVRTKLRKFLQKRPTLQS
VKEKGYIRDNVFGCHLDTLCHRENSTVPRFVEKCIRAVEIRGLDIDGIYRVSGNLAVIQR
LRHKADHEENLDLEDGQWEEIHVITGALKLFLRELPEPLFPFSFFDKFIAAIKIQDYPQK
VSYFRDLVRSLPLPNHDTMHLLFKHLLKVIEFGEKNRMSVQSVAIVFGPTLLRPQTESAN
ITVYMVFQNQIVELILKEFETVFAPS
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccttggtgtgcaacatggggctggtgctggtagagtttgagtatgagtacatg
ggccgcgatgggggcctggtgtccatcaagcccaacgaacgctacatcctgctggccaag
accaatgaccactggtggcacgtgaggaagaacgagcaagcaaggcccttctatatacct
gctaaatacgtcaaggagctccccgcagagttcccatccccgctggactttgctgaccca
cccagtcctgatttggttccaattccggttcctgcgccggtgccagtgccagtcccaaag
cactctgtaccagaccgggcagaaacgagggtgggagatgaggtgactatccgcctccgc
tccccgaagagacatcagaagactgagcaccgcatgtccacatttggcgtacccttagaa
ttccacaacccgtctcctggggcattgaagcgcggcgggctgaacgactcgctgccgggc
cttcactcctacgttgcccttgaggttccattaacagtgccctcgcctcaagccaacaat
agtgccaaacacaagaagcaattaagcctgagttccagtgtgctcttcggctcctccctg
tcggtggaggagtctctatccctgaacccccgagcccccagcttcagcccagctgacccc
ctccaccggccctcccaggccatcccagtggagacgtccatcattcctgatgccgaggtc
accggtggcaggattccccatcaggaacctctgaaagagccggaatgtcctctggagctg
gaggagggagaaaaggagaaatctagtgtggagcctgaggacgaatcgaaggaggacact
gagaatatttatgaatccatattggacctgaagctggatgagtcccctataatagtggag
aagaccccgactgtgagtcctgctgctgtggctgaacctacacctgttatcgctcccact
tctccatctccaacacagacacaggtggaaaatgccagccccaacactgctgtttacgcc
aacgtcaccgagctgaagaaaaacatcccacaatcccctccgttagtagctctgagtcct
gacttgcctcttacccaggagggatggcaggtgcacactgacaaggacagcgggaaagag
ttctattaccgcccagccacgggccaaaccacttgggccgacccccgtagcaccctcccc
tccacagacatggagctgcccaaggaggcgttggctgtcccggccctgtccatggccctt
tccccggccctgtccccagccctttccccggccctgtcccctgcctcatcccagggttcc
aactgggaacaggtgttggatgagaccacaggtcgaaactacttctataaccccacctct
ggggccacgtcctggggagctccggagcccatcgccccctcctctcctgttactgagcct
cctatgctgaagctcccagacagaggaccgccccctctcccaaaggaagactacctgaca
gaagaccacgaggctccagacacttcctcctcggtgttccccaaagacctcctgccaatg
ccacaggctaaacaggccgtcatacctcgggccactctagacagtgtcccggtgggctgg
aagcgctccatggatgcagatgggaagaccgttttcaccagcgaacgcacacaggagcag
tggctcaagtctgtggatcaagaaggaaagacgtactactacctgagagacggctccaga
tcccagtggaaccttccagcagagctcccagttgcatccagtctgcctaaggtgaggaat
ggagtggaccaggacagtccgccggttctgaagaactggagacacaccatcggcccagct
cagtttggcccctcccaagaagacaacaggttctttccaacacataggagaaacgtttcg
gacatcaccagtgaagcatccagctcaggcaactcccccgagacgccacaccatacacat
ctactggagaaggcagggatcctgaacaaaaccaaggtggccgacaatgggaaaagaatt
aggaagaattggagtccgtcatggacagtgctgcatggaggcattctcacgtttcacaaa
gacccaaaatatgcaccctcaggaaactctaacaagaccaatcagatcaccccagagtac
acagtggagctgcggggagccactgtgggctgggcccccaaggacaagtccagcaagaag
aacgttctggagttgaaaacgcgtcatgggtgtgagtacctgatccagtacgacacagag
agcatcatttgtgactggcacaggatcatactggacaccgtcagacagctggaccaagat
cacttgtcggaagaggaagaggaggagcctatggagaaatctccacttgcttcagacaga
gacaagaggaccagctcagccaccaaaattacgccaggcatcagtgccgagtcatcagat
caggggcgtgtccgcaccaaactacgcaagttcctccagaagaggcccacactgcagtca
gtgaaggagaagggctacataagagataatgtgtttggttgtcatctggacacgctgtgc
catcgagagaacagcactgtgcccaggtttgtggagaagtgcatcagggcagtggagatt
agaggtctggacattgatgggatctacagagttagtgggaatctagctgtcattcagaga
ctacgccacaaagcagatcatgaggaaaatctggacctagaggatggtcagtgggaggag
atacatgtgatcacaggggcgctgaagctcttcctgagggagctgcctgaacctctcttc
cctttcagcttcttcgacaagtttatcgctgccatcaaaatccaggactatcctcagaag
gtgtcatacttccgtgacctggtgaggtcccttcccctgcccaaccacgataccatgcac
ctccttttcaaacatctcctcaaagtgattgagtttggggaaaagaaccgtatgtcagtc
cagagtgtggccatcgtgtttggccctacgttactcaggccccagactgagtcggccaac
ataaccgtttacatggtcttccagaaccagattgtggagctcatcctcaaagagtttgag
acagtgtttgcccccagctga
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