Salvelinus namaycush (lake trout): 120034469
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Entry
120034469 CDS
T07522
Symbol
stx1b
Name
(RefSeq) syntaxin-1B
KO
K08486
syntaxin 1B/2/3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120034469 (stx1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120034469 (stx1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120034469 (stx1b)
Membrane trafficking [BR:
snh04131
]
SNARE
Syntaxin (Qa)
Stx-PM
120034469 (stx1b)
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
120034469 (stx1b)
Exosomal proteins of other body fluids (saliva and urine)
120034469 (stx1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
AAA_13
GNVR
Spectrin_Anc-1
VBS_C3G9
Lzipper-MIP1
Lge1
YtxH
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
120034469
NCBI-ProteinID:
XP_038836972
UniProt:
A0A8U0Q503
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Position
Sna41:4473876..4536793
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AA seq
288 aa
AA seq
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MKDRTQELRSAKDSDDDEEVVQVDRDHFMDEFFEQVEEIRVCIDKLSEDVEQVKKQHSAI
LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
TLSRKFVEVMTEYNTTQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
KMDSQIDKQALNEIETRHTEIIKLENSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
DFVERAVSDTKKAVKYQSQARKKKLMIIVCCTILGVVLASTIGGYLGF
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatcgtacacaagaactacgaagtgctaaggacagcgatgatgatgaagaagtt
gtccaggttgaccgggatcatttcatggatgagttctttgaacaggtggaagagatccga
gtctgtatagataagctgtcagaagatgtggagcaggtcaagaagcagcatagcgccatc
ctggcagcgcccaaccctgacgaaaagaccaagcaggagttggaggacctcacagctgac
atcaagaagacagccaataaagttcgctcaaaattaaaagcaatcgagcagagcattgag
caggaggaggggctgaacagatcatccgcagacctgcgaattcgtaagacacagcactcg
acgctgtcacgcaagtttgtagaggtgatgaccgagtacaacaccacgcagtccaaatac
agggaccgctgcaaggaccgtatccagagacagctggagatcactgggagaacaaccacc
aacgaggagctggaggatatgctggagagtggcaagcttgccattttcaccgatgatatc
aagatggactctcagatagacaagcaggccctgaatgagattgagactcgacacaccgag
atcatcaagctggagaacagcattcgtgagctgcacgacatgtttgtggacatggccatg
ctggtcgagagccagggagagatgattgacagaattgagtacaacgtggagcactccgtg
gactttgtggagcgggcggtgtctgacaccaagaaggctgtcaaataccagagccaggct
cgcaagaagaagctcatgatcatcgtctgctgtactattctgggagttgtcttggcgtcc
actatcggcggatacctgggcttttaa
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