Salvelinus namaycush (lake trout): 120034522
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Entry
120034522 CDS
T07522
Symbol
atf4b
Name
(RefSeq) activating transcription factor 4b isoform X1
KO
K04374
cyclic AMP-dependent transcription factor ATF-4
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04137
Mitophagy - animal
snh04141
Protein processing in endoplasmic reticulum
snh04210
Apoptosis
snh04261
Adrenergic signaling in cardiomyocytes
snh04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120034522 (atf4b)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120034522 (atf4b)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120034522 (atf4b)
09143 Cell growth and death
04210 Apoptosis
120034522 (atf4b)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
120034522 (atf4b)
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
120034522 (atf4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120034522 (atf4b)
Transcription factors [BR:
snh03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
AP-1(-like) components, CRE-BP/ATF
120034522 (atf4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
CCDC22_CC
Nop53
COG3_N
ZapD
bZIP_Maf
Motif
Other DBs
NCBI-GeneID:
120034522
NCBI-ProteinID:
XP_038837045
UniProt:
A0A8U0Q5H1
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Position
Sna3:complement(62318573..62321527)
Genome browser
AA seq
425 aa
AA seq
DB search
MTMMSSQFGLDDMEALLWGPSSLMADPMGSLRHQDEVTSIEGGASPLSSSSSSPLLLLSP
PPTPPSLLLQEEKAGADLLSFPWLSADQLGHTHYIGADDGKEDAFSGMDWMAERVDLSEF
DLDSFIGSCSPDGSPSSPEDLITSLECPMELDLLPLPTLPTPTDLPTTTDPLLPPTVSQP
QENPQEVFHSPPPCVPDAQEELEIKSEPQSPAPSPPPSPTFTLELGSEVYVSASVSEKPL
HLEVPQPVPSIVLSLSPTRIVVLLAPKQEVGVTTTTITIPEILSDSDSSFSSSGQLNQPS
IATTQSSFQNESKPYPKTPKSRPQHPDQPTTTSSGTMKSSTGGPPKEKKLKKMAQNKTAA
TRYRQKKKTEQEALSAECDELEQRNHKLAEKADSIANEIQYLKELMEEVRQAKSKKGLVT
SNCIV
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgatgagttcacagtttggcctggacgatatggaggccctactctgggggcct
tcctctctcatggctgaccccatggggtcgctgcgccaccaagatgaagttacctcgata
gaggggggggcttcacccctctcgtcatcttcctcttctccacttctccttctatcccct
cctcccactccgccgtcactgctcctccaggaagagaaggctggggcagacttgctgtcc
ttcccttggctatctgctgaccagctaggccacacccattacattggtgcagatgatggg
aaagaagatgccttttctggcatggactggatggccgagagggtagacctgagtgagttt
gatttggactcctttattggttcctgcagcccagacggttcccccagctcccctgaagac
ctcatcacttccttagagtgtcccatggagctggacttactccccctccccactctccct
actcccacggacctccccaccaccactgatccacttctccccccgaccgtgtcacagccc
caggaaaaccctcaggaggtgtttcattcacctcccccctgcgtccctgatgcccaggag
gagctggagatcaagtcggagccccagtccccagccccctctcctcctccatcacccacc
ttcaccttagagttgggcagtgaggtgtatgtctccgcgagtgtcagcgagaagccgctt
cacctggaggttccccagccggtccccagcattgtgctgtctctctccccaacccgcatc
gtcgtcctcctggcccctaaacaggaggtcggcgtgacaaccaccactatcaccatccca
gagatcctctctgacagtgacagcagcttcagctcctctggtcagctcaaccagccctcc
atcgccacaactcagtcaagtttccaaaacgagagcaaaccgtacccaaaaacccccaag
tctaggccacaacatccagaccagcccaccaccacatcgagtgggacaatgaagtcctcc
actggaggacccccaaaggagaagaagctcaagaaaatggcacagaacaagacggcggcc
acgcgctaccgccagaaaaagaagactgagcaggaggccttgagcgcggagtgcgatgag
ctcgagcaaaggaaccacaagcttgcggagaaagcggactccatcgccaatgagatccag
tatctcaaggagctcatggaggaggtgcgccaagcgaagagcaagaagggccttgtgacc
tctaactgtattgtgtaa
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