Salvelinus namaycush (lake trout): 120034531
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Entry
120034531 CDS
T07522
Name
(RefSeq) long-chain fatty acid transport protein 1-like
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03320
PPAR signaling pathway
snh04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
120034531
09158 Development and regeneration
04382 Cornified envelope formation
120034531
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
snh01004
]
120034531
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snh02000
]
120034531
Lipid biosynthesis proteins [BR:
snh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
120034531
Transporters [BR:
snh02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
120034531
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Ortholog
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
120034531
NCBI-ProteinID:
XP_038837053
UniProt:
A0A8U0Q5Y3
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Position
Sna41:19784616..19796033
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AA seq
648 aa
AA seq
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MRNAVSASLCLGSLGLLRLFGVPWSWSLAAGFGVFLGTGGWKYLYIVVRTAKRDLNGLYV
LLRVKIALWHHLRRNSNIPSIFAQTVKQHPNKPALIYDATGETWTFTQLDLLSNAVAQWA
LAQGWTPGDVVALFMESRPLQVALWLGLAKVGVEAALINFNLQRDALLHCVGVSASRGIV
FGAELAGAMLEVSSSLSPSMVRFCTGELSVDCLASLAAQNLDYILASAPTLPPPPCIPPK
SFNDRLFYIYTSGTTGLPKAAIVVHSRYYRIAAFGYHAFRMRQDDIIYDCLPLYHSAGNI
MGVGQCLINGLTVVVKKKFSASRFWEDCIKHNCTVVQYIGEICRYLLSQPVRPSEKGHRV
RLAVGNGLRPSVWEAFTERFGVAQVGEFYGATECNCSIANMDGKVGACGFNSRILPNVYP
IRLMKVDEETTELVRDRHGLCVPCLPGEPGLLVGRINQQDPLRRFDGYANQDATRKKIAN
NVFKKNDSAYLSGDVLVMDELGYMYFRDRSGDTFRWRGENVSTTEVEGTLSGLLGQADVA
VYGVAVPDVEGKAGMAAIADPTGTFDCDAFLREVQQALPPYARPVFLRISPQVDTTGTFK
IQKIRLQREGYDPRLSTDQIYFLNSRAGRYEAVNEELHSAIVEGRMAL
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatgcggtgagtgcctctttgtgtctgggatcgctgggtctgctgcgtctcttc
ggggtcccctggtcctggagcttagcagcaggcttcggggtctttctgggcacaggtggt
tggaagtacctctacatcgtagtccgtactgccaaaagagacctaaatggcctttacgtg
ttgttacgagtcaagatagccctgtggcaccacctacggcgcaacagcaatatcccctcc
atctttgcccagacggttaagcagcacccaaataaacccgccctcatctacgatgccaca
ggagagacgtggaccttcacccagctggacctgctgtctaacgctgtggcccaatgggct
ctggcccagggctggaccccgggggatgtggtggccctcttcatggagagccggcccttg
caggtggccctctggctaggcctggccaaggtgggggtggaggcagcactcatcaacttc
aacctgcagagggacgctctcctgcactgtgttggagtgtctgcgtccagagggatcgta
ttcggagccgagctggctggtgccatgttggaggtgagctcatccctgagcccgtcgatg
gtgcggttttgtacaggagagctcagtgtagactgtctggcctccttggctgcccagaat
ctggactatatcctggcctcggcccctacactgccccctcctccctgcatcccacccaag
agcttcaatgatcgtctgttctatatatacacctcaggcaccacaggactccctaaagct
gccatagtggtgcacagtcggtattaccgtatcgctgcttttggctaccatgcttttcgc
atgcgccaggatgacatcatctacgactgccttcccctctaccactctgcaggtaatatc
atgggtgtaggccagtgcctcatcaatggactcactgtggtggtgaagaagaaattctct
gccagtcgcttctgggaagattgcatcaagcacaactgcactgtggtgcagtacataggg
gagatctgtcgctacctgctgtcccagccggtgcggccatctgagaagggtcaccgggtt
cgcctggcggtggggaatgggctgcgccctagcgtctgggaggccttcaccgagcgcttt
ggggtggcccaggttggggagttctacggagccaccgaatgcaactgtagcatcgccaac
atggacggcaaggtgggagcttgtgggttcaacagccgcatcctgcccaatgtgtaccca
atccgcctcatgaaagtggatgaggagaccacggagctggtgagggacaggcacggcctg
tgtgtgccctgccttcctggggagccagggctgctggtgggaaggatcaaccaacaggac
ccgctaaggaggtttgatggctacgccaaccaggacgccaccaggaagaagatcgccaac
aacgtcttcaagaaaaatgactcggcatatctgtcaggggatgtgttggtgatggatgag
ctgggctacatgtacttccgggaccgcagtggggacacgttccgctggagaggagagaat
gtctccaccaccgaggtggagggaacactgagtggtctgctgggccaggccgatgtggct
gtgtatggggtagctgtaccagatgtggaagggaaggcagggatggctgccatcgcagac
ccaacagggacatttgactgtgatgcgttcctgcgagaggtccaacaggccctgcctcct
tacgcccgccccgtgttcctacgcatctccccacaagtagacaccacaggtacctttaaa
atccagaagatccggttgcagagggagggatacgatccgcgcttatcaaccgaccagatc
tactttttgaactccagagcagggcgttatgaggctgtgaatgaggagctacacagtgct
atagtggagggtagaatggctctatga
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