Salvelinus namaycush (lake trout): 120034532
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Entry
120034532 CDS
T07522
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120034532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120034532
03012 Translation factors [BR:
snh03012
]
120034532
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
120034532
Translation factors [BR:
snh03012
]
Eukaryotic type
Release factors
120034532
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
LPD34
DUF6406
Motif
Other DBs
NCBI-GeneID:
120034532
NCBI-ProteinID:
XP_038837055
UniProt:
A0A8U0Q5K8
LinkDB
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Position
41:complement(19821979..19842022)
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AA seq
579 aa
AA seq
DB search
MDPRDAAPDSWEQEDDVEAPVDGKLDSEFAALNVNAKPFVPNINAVEFVPSFFQKGPSED
PDSGADVEPVVATMEVAETAAPVENGDSEMITEETWDLKGVEPNEEEPGGGPGGDGGPIV
VEEILEEEVLEEEEDLPIMPKVVALPPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGM
VEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAP
GHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIILVN
KMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEPVESCTWYT
GLPFIPHLDSLPNLNRVSDGPVRLPIVDKYKDMGTVILGKLESGSISKAQQLVMMPNRHT
VEVLSLLSDDVETDDASPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVII
EHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTA
GTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVAERD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacgctgcccctgattcctgggaacaagaggatgatgttgaggccccg
gttgacgggaaactcgattccgaattcgccgccctcaacgtgaatgccaaaccgtttgtc
cccaacataaatgccgtcgaatttgtcccgtccttctttcagaaaggcccctcggaagat
cctgattccggtgcggacgttgaaccagttgttgccaccatggaggtcgcagaaactgca
gccccggtggagaacggcgactctgaaatgatcacagaggagacatgggacctgaaaggg
gtggagcccaatgaggaagaaccaggaggagggcctggtggcgacgggggaccaatagtt
gttgaggagattctggaggaggaagtcctagaggaggaggaagacttgccaatcatgcct
aaagtggtcgccctcccaccagacgcgcccaagaaggaacatgtgaacgtggtgttcatc
ggtcatgttgatgctggcaagtctaccatcggaggacaaatcatgtatttaacaggcatg
gtggagaagagaactctggagaagtatgaaagagaagccaaggagaagaacagggaaacc
tggtacctctcctgggctctggacactaaccaggaggagcgagacaaggggaagactgtg
gaggtgggcagagcgtactttgaaactgagaaaaagcactttaccatcctggatgcgcca
ggccacaaaagctttgtgcccaatatgatcggaggagcgtcgcaagctgacctggctgtg
ctggtgatctcagccaggaagggagagtttgagacgggctttgagaagggtggacagaca
cgggagcacgccatgttggccaaaacggcaggggtgaagcatctgatcatcctcgtcaac
aaaatggacgaccccacagtgaactggagcctagagaggtacgaagaatgcaaggaaaaa
ctagtgccatttttaaagaaggttggcttcaaccccaagaaagacattcacttcatgccc
tgctccggcctcacaggagccaacctcaaggagcctgttgagtcgtgcacttggtatacg
gggttaccattcattccacatctggacagtttgccaaacttaaacagagtgagcgacgga
ccagtcagattacccatcgtagacaaatacaaggacatgggtactgtcatcctggggaaa
ctggagtcagggtccatcagtaaagcacagcagcttgtcatgatgccaaacaggcacaca
gtggaggtgttgagcctgctgagtgatgacgtggagacagacgatgcttctcctggagag
aacctgaagctaagactgaagggcatcgaggaggaggagatcctgccaggcttcatcctc
tgtaacgctgagaacctctgccactctggacgcacctttgacgcccagattgtcatcatt
gaacacaagtccattatctgccctggttacaatgctgtcctccacatccacacctgcatc
gaagaagtgcaaattacggccttaatctgtctggtagacaagaagtcgggagagaaaagt
aagacgcgaccgcgctttgtgaaacaggaccaggtgtgcattgcccgtctgcgcaccgcc
ggaaccatctgccttgaaaccttcaaagacttcccccagatgggacggttcaccctacgg
gatgaaggtaagaccattgccattggtaaggtgctgaagctcgttgctgagagggactga
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