Salvelinus namaycush (lake trout): 120034596
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Entry
120034596 CDS
T07522
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43-like
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120034596
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120034596
Enzymes [BR:
snh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120034596
Peptidases and inhibitors [BR:
snh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120034596
Ubiquitin system [BR:
snh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120034596
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
120034596
NCBI-ProteinID:
XP_038837129
UniProt:
A0A8U0U1P6
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All DBs
Position
Sna41:complement(13710612..13811830)
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AA seq
1222 aa
AA seq
DB search
MDKHCRVKDEATSKAAKRKENKQKHGRLFRKKSLKSVGSFVNKIIKTLGTFTHFGDVAVQ
GAEDDDGGFRDGTPCTLSANSGNIKEDVAGDDSVKNNAIASSRCSVKERVLWCYGGNIPG
VVGLKNHGNTCFMNAVIQCLSNTDLLAEYLGLERYKLDFSRRKINGIVKSEDTQHARGEV
TEQLASLVRALWTLEYIPQLSVEFKSIVSKYGSQFRGNSQHDALEFLLWLLDRVHEDVNL
SSCSNNNNKTKAPGKGPGISEEAMVTEPPHSQQPGARHSFVQEHFQAQYKSSLTCPHCHK
QSNTFDPFLCISLPIPLRHTRPLCVTLVFSTKGQRYLRIGLAVPLFGSLAFLRRMLADEG
KISPDQVILTEIYTTGFQRSFFDEEDLTCIAETDIIYAFQAPPLYIRGGSAQFSGYHHSL
PSSPYSSGPEGQRLPPSGTLSSEFLNHGVPVKILLLVCNAAWNAQQAVRFGPPFLMREDR
SISWDQLQQSILSKLYYLMINGAQAQNARVLFKIRVVGGSASYSYLSPQDGRPLYHPAVN
RALNLCGSGGPPHVKLIIEWEHRIKDCLFGNIQEEVVKDAESVRGQHQQHVQQHSCTLDE
CFQLYTKEEQLAPDDAWKCPHCKQLQQGMVKMSLWTLPDILILHLKRFRQVGERRNKLAT
LVRFPLDGLDMAPHVVKRSQSTRLPPHGPLPPHGPLLPGPLHPAWKQPCPPDVAPPDFLY
DLYAVCNHHGGMHGGHYTAFCRNSLDAQWYGYDDSSAEPVTEGEVCTRGAYILFYQRRNT
IPPWSASSSLRGSTSSSTSDHWLIRLTRDSLFSGGSTSDPPGPTPTPESPELPVFEDEPL
KTETDGFENKLFVRGTQGRSVSMRSPTKTKDTLSKVLPLRWSFGSKDRPKPSAPRRGELV
EYLESGRRPRCTKDPIITLMATPPQGGHRDLGSSPSGSSLSCMDRSNSEACDSPRVPEGQ
SRPAVERNSSLGLNIITKARDDSSLGRRSSKRFRQDQGRTVDPHRGSTEGVHISHSAPPS
RDSTLKRPKAQAGLTSRVGVLQAGLHPEERKGMRGQEVRSHDSLLSFFKSGFLKKDAQST
PSKGEEVRANGHGRASKVANGSSSKLSLSNGTLNGAALEEKRANGAPRSDCRHSKGQLVN
GRAGSHSSAADIKRAHSSSNIQTKLDLTLRRCASLQKNGQVAPPAPRSSLATDKPSYATL
QRARYSTTSLGRQQRPVPESCF
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggataaacactgcagagtgaaggatgaagccacgtcaaaggcagcaaagcgcaaggaa
aacaaacagaaacatggacggctttttcgaaagaaatcattgaagtcggtggggagtttt
gtaaataaaataatcaaaactttgggcacttttacccactttggagacgttgcagttcag
ggcgcagaggatgacgatggggggtttcgtgacgggacaccttgcacactcagtgccaac
tcaggaaatatcaaagaggatgtcgccggggatgattctgttaaaaataatgcgatagct
tcttcccgttgctcggtgaaagaaagggttttatggtgctatggtggcaacattccaggt
gttgtaggcttgaaaaatcacgggaacacctgtttcatgaacgccgtgatccagtgcttg
agcaacactgacctgctcgcagagtatctcgggttggaacgatataaattggattttagt
cgaaggaaaattaatgggattgttaaaagtgaagacacgcagcatgccagaggtgaagtc
actgagcagttggcatcacttgttagggcactctggactctggaatacatcccgcaactg
tccgtggaattcaagagtatagtatccaagtatggatcccaattccgaggaaactcccaa
catgacgccctggagttcctgctttggcttctggaccgagttcacgaggatgtcaacttg
tcctcctgcagcaacaacaataacaagaccaaagccccagggaagggccctggtatatca
gaggaggcgatggtcactgagcctccccactcgcagcagcccggggcacgccacagcttt
gtacaggaacacttccaggcacaatacaagtcatcgctgacctgccctcattgtcataaa
cagagcaacacctttgaccctttcctctgcatttcacttcccatccctctgcgccacacc
aggcctctgtgtgtaactctggtcttcagtacgaagggccagagatacctgcgcatcggg
ctggctgtgcctctctttggctcgctggcctttctgagaaggatgttggcggatgagggg
aagatctccccagaccaggtgatcctgacagagatctacaccacaggctttcagcgctcc
ttctttgatgaggaggatctgacgtgcatagccgagactgacatcatctatgccttccag
gccccgcccctatacatcagaggaggctctgcacaattctcagggtaccaccacagcctg
ccgtcctcgccgtactcctccgggcccgaaggtcaaaggttacctccatccggaactttg
tcatcagagttcctgaaccatggtgtgccggtgaagatcctgttgctggtgtgcaacgcc
gcctggaatgcccagcaggctgtcaggtttggacctccgttcctgatgagggaggaccgc
tccatctcctgggaccagctgcagcagagcatcctcagcaagctctactacctgatgatc
aacggagcacaggcccagaatgccagagtgctgtttaagatccgtgtggtgggaggatca
gcgtcctacagctacctctccccccaggatggacggccgctctaccacccagcagtgaac
agagctcttaatctctgtggctcaggaggaccgccccatgtgaagctcatcatcgagtgg
gaacacagaatcaaagactgcctgtttgggaacatccaggaggaggtggtgaaggatgct
gagagtgtgagaggccagcatcagcagcacgtccagcagcacagttgtaccctggacgag
tgctttcagctctacactaaagaggaacagctggctccagacgatgcatggaaatgtccc
cactgtaagcagctgcagcagggcatggtgaagatgagcctgtggacgctgcctgacatc
ctcatcctccacctcaagcgcttccggcaggtgggcgagcgccgcaacaagctggccacg
ctggtgcgcttccccctggacggcctagacatggcgccccatgtggtgaagaggagtcag
agcacccggctgcccccccacggtcctctgcccccccacggtcctctgctccccggcccc
ctgcacccggcctggaaacagccctgcccacccgacgtggcccctccagacttcctatat
gacctctatgccgtgtgtaaccaccacggaggcatgcatggtggacattacacagcgttc
tgcaggaactcattggacgcccagtggtatgggtatgatgacagcagtgcagagccagtc
acagagggggaggtgtgcacacggggagcctacatcctcttctaccagagacgcaacacc
atccctccatggtcagccagctcctctctcagaggctccaccagctcctccacgtcagac
cactggctgatccgtctgacgcgggacagcctgttctctggggggtccacctctgaccct
cctggccccacaccaacccccgaatccccagagctccctgtgttcgaggacgagcctctc
aaaacagagacagatgggtttgagaataagctatttgtccgaggcactcagggcaggagc
gtgagcatgaggtcacccactaagaccaaggacaccctgagcaaagtgctgcccctgcgc
tggtcctttggttccaaggaccgccccaaaccctccgcccccaggcgaggggagctggtg
gagtacctggaatcagggcgcaggccgcggtgcaccaaggaccccatcatcaccctaatg
gccaccccaccccagggcgggcacagggacctgggcagctcccccagtgggagcagcctg
agttgcatggacaggtccaactctgaggcctgcgactccccaagagtaccagagggccag
agcaggcctgccgtagagaggaactccagcctggggctcaatattatcactaaagccagg
gatgacagctcactgggccggaggtcctccaagaggttcaggcaggaccagggcagaacc
gtggaccctcacagaggctccactgagggggtccacatcagtcacagtgcccccccaagt
agggactccacactgaagaggcccaaggcccaagcagggctgacctccagggtaggggtg
ctgcaggctggtctacaccctgaggagaggaaggggatgaggggtcaggaggtaaggagc
cacgacagcctcttgtcctttttcaaatctggcttcctgaagaaagacgctcagagtaca
cctagcaagggggaggaagtccgggccaatggccacggacgagccagcaaggtggcaaat
ggtagttcgtctaaactctccctctccaatgggaccctgaatggcgcagcgctggaggaa
aagagggccaacggcgcccctagaagtgactgccgtcacagcaaagggcagcttgtcaat
gggagggcagggagtcacagctctgctgctgacatcaagcgtgcccacagctccagtaac
atccagaccaaactggacttgaccctgcgcaggtgtgcctctctgcagaagaacgggcag
gtagctcccccggccccccgcagcagcctggccacagacaagcccagctatgccaccctg
cagcgggcacgctacagcaccacttccctgggcaggcagcagagacccgtccccgagtcc
tgcttctga
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