Salvelinus namaycush (lake trout): 120034722
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Entry
120034722 CDS
T07522
Symbol
zgc:165520
Name
(RefSeq) syntaxin-3
KO
K08486
syntaxin 1B/2/3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120034722 (zgc:165520)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120034722 (zgc:165520)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120034722 (zgc:165520)
Membrane trafficking [BR:
snh04131
]
SNARE
Syntaxin (Qa)
Stx-PM
120034722 (zgc:165520)
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
120034722 (zgc:165520)
Exosomal proteins of other body fluids (saliva and urine)
120034722 (zgc:165520)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
AAA_13
Relaxase_C
YtxH
FUSC
STX6_10_61_N
T4SS
FlaC_arch
Med11
CorA
DUF1664
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
120034722
NCBI-ProteinID:
XP_038837253
UniProt:
A0A8U0Q539
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All DBs
Position
Sna42:6467359..6471279
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AA seq
285 aa
AA seq
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MKDRLEQLKAKSDVAGDDVEVPVENQAFMDDFFAQIEEIRSSIDKIDESVAQAKKLYSTI
LSAPTSEQKTQDDLEAVTNDIKKAAGTARNKLKSIEKQLETNTDERSSADMRIRKSQHAI
LAKKFVEVMTKYNEAQTDFRDKSKGRIARQLEITGKTTTDEELEEMLEGGNAAVFTAGIM
ESGISKQALNEIEARHKDIVRLESSIKELHDMFVDIAMLVENQGGMIDKIESNMDQSVGF
VERAVADTKKAAKFQQEARRKQMMIMCCCVILCVIGGSFLYSFIK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgattggaacagttgaaggcgaaaagtgatgtggctggagacgatgtggag
gttccagtggagaatcaagcctttatggatgacttcttcgcccagattgaggagattcgc
agcagcatcgataagatagatgagagtgtggcgcaagcaaagaagctgtactctaccatc
ctctccgcccctacatcagagcagaagacgcaagatgatttggaggcagtcaccaacgac
atcaagaaagcagccgggaccgctcgcaacaaactaaagagtatcgagaagcaacttgag
acaaacacagatgaacggtcgtcagcagacatgaggattcggaagtctcagcatgccatc
ctggccaagaagtttgtggaggtgatgaccaagtacaacgaggctcagacggactttaga
gacaagagcaaaggccgcatcgcccggcagctggagatcacgggaaaaacaacaaccgac
gaggagctggaggagatgttggaaggagggaacgcagccgtcttcaccgcagggatcatg
gagtcaggcatatcaaagcaggcgttgaatgagattgaggcgcggcacaaagacattgtg
aggctggagagcagcatcaaagagcttcatgacatgttcgtggacattgctatgctggtg
gagaaccagggcggtatgattgacaagattgagagcaacatggaccaatcggtgggcttc
gtagagcgggcggttgccgacaccaagaaagcagccaaatttcagcaggaggcccgtagg
aagcagatgatgatcatgtgttgctgtgtcattctctgtgtcatcggagggtccttcctc
tacagctttatcaaatag
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