Salvelinus namaycush (lake trout): 120034768
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Entry
120034768 CDS
T07522
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03015
mRNA surveillance pathway
snh04261
Adrenergic signaling in cardiomyocytes
snh04382
Cornified envelope formation
snh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120034768
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120034768
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
120034768
09158 Development and regeneration
04382 Cornified envelope formation
120034768
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120034768
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120034768
03036 Chromosome and associated proteins [BR:
snh03036
]
120034768
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
120034768
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
120034768
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
120034768
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40_WDHD1_1st
WDR55
Beta-prop_WDR3_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
BCAS3_WD40
Motif
Other DBs
NCBI-GeneID:
120034768
NCBI-ProteinID:
XP_038837298
UniProt:
A0A8U0Q572
LinkDB
All DBs
Position
42:19506916..19536242
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AA seq
443 aa
AA seq
DB search
MEEESVTRKINNSFLRDHNYATEADIISTVEFNPSGELLATGDKGGRVVVFQREQETKSE
PQRRGEYNVYSTFQSHDPEFDYLKSLEIEEKINKIRWLPQQNAAYFLLSTNDKTVKLWKI
SERDRRPDGYNLKDEDGRIRDPSTITSLRVPVLQNTDLMVEATARRVFSNAHTYHINSIS
VNSDLQTYISTDDLRVNLWNLEITDQSFNIVDIKPCNMEDLTEVITAAEFHPQQCNTLAY
SSSRGSVRLCDMRKQALCDTHCKFFEEPEDPSTRSFFSEIISSISDIKFSHSGRFLMTRD
YLTVKVWDLNMETRPVQTYQVHDYLRGKLCSLYENDCIFDKFECVWNGSDSVIMTGSYNN
FFRMFDRNTKKDVTLEASRENSKPRAILKPRKVCVGGKRRKDEVTVDSLDFSKKILHSAW
HPQENIIAVAASNNLYIFQDKVT
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagagtgtcacccgcaagatcaacaacagcttcctacgcgaccacaactat
gctactgaagctgacatcatctccacggtggagtttaacccttcgggggagctgctggcc
acaggggacaaaggaggaagagtggtggtcttccagagagaacaggagactaaaagcgag
ccccaaaggcgaggggagtataatgtgtacagtacgttccagagtcatgatccagagttt
gactacctgaagagtctggagatagaggagaagatcaacaagatcagatggctgccgcag
cagaacgctgcctacttcctcctctccaccaacgacaagacagtgaagctctggaagatc
agtgagagagacagacgaccagatggatacaacctgaaggatgaagacggacgaatcaga
gacccatctacaatcacctcactacgggttcctgttctccagaacacagatctgatggtg
gaggcgacagcgcggcgtgtgttcagtaacgcccacacctaccacatcaactccatctct
gtgaactctgacctccagacctacatctccaccgacgacctcagggtcaacttgtggaac
ctggagatcaccgaccagagcttcaacatcgtggacattaagccgtgtaacatggaggat
ctgacggaggtgattacagcagcagagttccatcctcagcagtgcaacaccttggcttac
agcagcagtagagggtcagtacgactctgtgacatgaggaaacaggcgctctgcgacaca
cactgcaagttctttgaggagccagaggacccctccacccgttcatttttctcagagatc
atctcttccatctcagacatcaagtttagtcacagcgggcgcttcttgatgacacgggac
tacctgacggtcaaggtgtgggacctcaacatggagaccagaccggtccagacataccag
gtccatgactacctgaggggtaagctgtgttctctgtacgagaacgactgcatcttcgac
aagtttgagtgtgtctggaacgggtcagacagtgtcataatgacggggtcttataataat
ttcttccggatgtttgatcggaacaccaagaaagatgtgaccctggaagcttccagagag
aacagcaaaccccgggccatcctcaaaccacgcaaggtgtgtgtgggtgggaagcgtcgt
aaagacgaggtgactgttgacagtctggacttcagtaagaagatcctccactccgcctgg
cacccacaggaaaacatcatcgctgtggcagccagtaacaacctctacatcttccaggac
aaggtcacctag
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