Salvelinus namaycush (lake trout): 120034788
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Entry
120034788 CDS
T07522
Name
(RefSeq) TBC1 domain family member 9-like
KO
K19951
TBC1 domain family member 8/9
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120034788
Membrane trafficking [BR:
snh04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120034788
Endosome - Golgi transport
Rab GTPases and associated proteins
120034788
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
120034788
NCBI-ProteinID:
XP_038837326
UniProt:
A0A8U0Q3V6
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All DBs
Position
Sna42:complement(13867240..13897907)
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AA seq
1292 aa
AA seq
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MWVHPEEVLQAGALWITERANPYFILQKRKGHGDGRGGLAGLLVGTLDVVLDSSARVAPY
RILYQTPDSLIYWIIAHGCSRKEITEHWEWLEQNLLQTLSIFENENDITTFVKGKVQGII
AEYNKNHDVKEDDDTDKFKEAICTFRKLFGMPEEEKLVNYYSCSYWKGRVPRQGWLYLSI
NHICFYSYLLGKEAKLVIRWADITQLEKSATLLLPDAVKVSTRVAEHVFSVFLNINETFK
LMEQLANIAMRQLLDNKGFEQDRSLPKLKRKTPKKVSALKRDLDARAKSERYRALFRLPK
DEKLDGHTGCTLWTPFNKMHILGQMFVSTNYICFTSKEETLCSLIIPLREVTIVEKADSS
NFLPRSVSISTKNRMTFLFANLKDRDFLVQRISDFLQQTTSKIYFEREITGSVNSSDDEV
YSQQGSLLSSSPQRSSLGSEGSSEGERQFNLNDNSVPTATQALMTMYRRRSPEEFNPKLA
KEFLKEQAWKNHFTEYGQGVCMYRTEKTKDLVLKGIPENMRGELWLLFSGAINEMATHPG
YYEDLVEKSMGKYNLATEEIERDLHRSLPEHPAFQNEMGIAALRRVLTAYAFRNPNIGYC
QAMNIVTSVLLLYAKEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELAREYVPEL
YDCMQDLGVISTISLSWFLTLFLSVMPFESAVVVVDCFFYEGIKVIFQLALSVLHANIHQ
LLGAKDDGEAMTVLGKYLDSVTNKDSTLPPIPHLHSLLTDDGDPHPEVDIFKLVRSSYEK
FGSIRADVIEQMRFKQRLRVIQTIEDTTKRNVVRTIVTETAFNIDELEELYVLFKAEHLT
SCYWGGTGGSNPTERHDPSLPYLEQYRIDLEQFSGLFSLLFPWAPVNGAHADPLALRFFR
LLDHNGDSLINFREFISGLSVLCHGDLTEKLKLLYKMHVIPEVTHEQEEPDSAFEATQYF
FEDITPETSNGLDPKCKSEKDDGFVRVTFKTEKVKKLHTPDYRHYLRLWNQGTKNKLDNM
KDLPKLNQSQFIELCKTLYNMFSEDAQEQELYHATATVTSLLLEMGEVGKLFCHSKDQEE
QDQDDPEEAKTSGPAQDGGTKPGGVFQQRGQGEGEESQARPCGPAKRDGRGEQLSAMEDI
KLEDSSPKDTGTSSSMLISDDETKDDTSMSSYSVLSGGSHELDDKLHCEDINDDTVLVRS
ENRPHGGGGGNGPHGEGGPHGRDGGLPHSTSIDKDWAITFEQFLASVLTEQALVLYFEKP
VEVTARITNAKNVRKVGCSLLFPSDYEISLSG
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtgcaccctgaagaggtgttgcaagcgggtgcgttgtggataaccgagcgagca
aatccctatttcatcctccagaaacgcaagggccacggggacggcagaggaggactagcg
ggactgttggtgggaacactggacgtggtgctggactccagtgctcgagtggccccctac
agaatcctttaccagacacctgactccctaatctactggatcattgcgcatgggtgctcc
cgtaaggagatcacagagcactgggagtggctggagcagaacctcctacagacactgtcc
atctttgagaacgagaatgacatcactacctttgtcaagggcaaagttcagggtattatc
gccgagtacaacaagaaccacgacgtgaaggaggacgatgacactgacaaattcaaggag
gccatctgtacgttccgtaagctgtttggcatgcctgaagaggagaagctggtcaactac
tactcctgtagctactggaagggccgtgtgccccggcagggctggctctacctcagcatc
aaccacatctgcttctactcttacctgctggggaaagaagccaagctggtgatccgctgg
gccgacatcacccagctggagaaaagcgccaccctcctcctccccgatgcagtcaaggtg
agcactcgggtggctgagcacgtcttctcggtcttcctcaacatcaacgagaccttcaag
ctgatggagcagctggccaacatcgccatgagacagctccttgacaacaagggctttgag
caggaccgctctctgcccaaactcaagaggaagacacccaaaaaggtgtctgccctcaag
agggacctggatgccagggctaagagcgagcgttaccgggccttgttccgtctgcccaag
gatgagaagctggacggacacacgggctgcaccctttggacccccttcaacaagatgcac
atcctgggccagatgtttgtctccactaactacatctgcttcacttccaaggaggagacc
ctgtgcagcctcatcatccccctaagagaggtgacgatagtggagaaggcggacagctcc
aactttttgcccaggtcagtgtccatcagcaccaagaacaggatgactttcctgttcgcc
aacctcaaggaccgggacttcctggtccagaggatctctgacttcctgcagcagaccacc
tccaagatctacttcgagagggagatcaccgggagtgtgaacagctccgacgatgaggtg
tactcccagcagggctctctcctctccagcagtccccagcgcagcagtctgggctcagag
ggctcctccgagggtgagcgccagtttaacctcaatgacaacagcgtgcccaccgccacc
caggccctcatgaccatgtaccgccgccgctcgccggaggagttcaaccccaaactggcc
aaggagttcctgaaggaacaggcgtggaagaaccacttcaccgagtacggccagggggtg
tgtatgtaccgtacagagaagaccaaggacctggtgcttaaaggcatcccagagaacatg
aggggagagctgtggctgctcttctctggggcgatcaacgagatggcgacccaccctggc
tactatgaggacctggtagagaagtctatggggaagtacaacctggccacggaggagatc
gagagagacctgcaccgctccctccctgaacacccagccttccagaacgagatggggatc
gctgccctacgaagggtccttactgcctacgccttcagaaaccccaacataggctactgc
caggccatgaacattgtgacgtcggtgctgctgctgtatgctaaagaggaggaggccttc
tggctgctggtggctctttgtgagcggatgctgcctgactactacaacaccagggtcgta
ggagctctggtagaccagggtgtttttgaggagctggccagggagtacgtccctgaactc
tacgactgcatgcaggacctgggagtcatctctaccatttccctctcctggttcctcacc
ctgttcctcagtgtcatgcccttcgagagtgctgtggtggtggtcgactgcttcttctac
gagggcatcaaggtcatcttccagctggcgctcagcgtgctgcacgccaacatccaccag
ctgctgggggccaaggacgatggagaggccatgaccgtgctgggaaagtacctggacagc
gtgaccaataaggacagcaccctgcctcccatcccccacctgcactccctgctgacagac
gatggggatccccacccggaggtggacatcttcaagctggtccgcagctcctacgagaag
tttggctccatccgggcagacgtgatcgagcagatgcgcttcaaacagaggctaagggtc
atccagaccatcgaggacaccaccaaacgcaatgtggtcagaaccattgtcacggagact
gccttcaacatcgacgaactggaggagctctacgttctgttcaaggcggaacacctgacc
agctgctattggggcggaacgggtggcagcaaccccacggagcgccacgaccccagcctg
ccctacctggagcagtaccgcatcgacctggagcagttcagcgggctgttctccctgctc
ttcccctgggcccctgtcaacggggcccacgcagaccccctggccctgcgcttcttcagg
ctcctggaccataacggagactctctgattaatttccgggagtttattagtggactgagt
gttttatgccatggggatctgactgagaaactgaagctcctgtacaagatgcatgtgatt
cctgaggtgacccatgagcaggaggagccagactctgccttcgaggccacccagtacttc
tttgaggacatcaccccggaaacttccaatggccttgaccccaagtgcaagagcgagaag
gatgatggctttgtcagggtcacgttcaagactgagaaagtgaagaaactgcacacccct
gactaccgccactacctgaggctgtggaaccagggcaccaagaacaagctggacaacatg
aaggatctgcccaaactcaaccagagccagttcatagagctgtgcaagacactgtacaac
atgttcagcgaggacgcccaggagcaggagctgtaccacgccacggccaccgtcaccagc
ctgctgctggagatgggcgaggtgggcaagctcttctgccattccaaggaccaggaggag
caggaccaggacgatccagaggaggccaaaaccagtgggccagcccaagatggagggacc
aagcctgggggtgtcttccagcagaggggccagggagagggggaggagagccaggccagg
ccgtgtggccctgcgaagagggacggcaggggcgagcagctgtctgccatggaggacatt
aagctggaggactcgtccccgaaggacacagggacatcgtcctccatgctcatctcagat
gacgagaccaaagacgacacgtccatgtcgtcctactctgtgctcagcggcggctcccat
gagctcgacgacaagcttcactgcgaggacattaatgacgacacggtcctggtgcgcagc
gagaacaggccccatggtggagggggagggaacgggcctcacggtgaaggtgggccccat
ggcagagatggggggctgcctcacagcaccagcatagataaagactgggccatcaccttt
gagcagttcttggcatcggtgctcactgagcaggccctggtgctttactttgagaagcca
gtggaggtgaccgcacgtatcaccaatgccaagaatgtgaggaaagtggggtgctcccta
ctgttccctagcgactatgagatctccctgtctgggtaa
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