Salvelinus namaycush (lake trout): 120034896
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Entry
120034896 CDS
T07522
Symbol
arhgef38
Name
(RefSeq) rho guanine nucleotide exchange factor 38
KO
K20711
Rho guanine nucleotide exchange factor 38
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120034896 (arhgef38)
Membrane trafficking [BR:
snh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120034896 (arhgef38)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
BAR
SH3_9
SH3_2
SH3_1
Nucleoporin_C
SH3_3
Motif
Other DBs
NCBI-GeneID:
120034896
NCBI-ProteinID:
XP_038837473
UniProt:
A0A8U0U3F1
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All DBs
Position
Sna42:complement(16211495..16231300)
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AA seq
831 aa
AA seq
DB search
MDPNKEANNGSEKEKEKEKVIKRRTRPNFLRYMHLERRKTDTIVVANDDTAADIKGDINL
GTLVRRSQSDKTEYSAKLKEKMAPLSPLSSILASPALDPAEVRLRKMSRRSKVIQELVQT
ERDFLTDLELCIREVVKPLRDRQVVDVDRLFTNMETVCEVSAALLHRLQEATAEPDPEAL
VIGEVFIQAKAALEDVYKIYCYHHDDANSLLKSYEKEEGIKQHFITCVLSLKQIYDQEGK
PNLLDMGSLLIKPVQRVMKYPLLLGELWQATPSDHPDNRPLQEALTAAKIINVNINEFKR
RKDIVMKYKRTEEDGGTLMGKLNKFSIHSIRKKSDRLTGYLKILTGVEPQVRDEVFDKEE
KLFRSLEKAVRQLVKNVHCYLIHIQEMVGVAVQNAADLEDIMKDPDKIDTNGTQHLKNGN
NPYKHFKERMAHLVLAPLSSLQGMFAAPQKLIQKRYDKLLDYCSRLERSPSSSSTSSASS
SSSSPSPVSEDQGQVAARRDYAALNAQLVEELQRFNMAAHTILSNCVLCLVTLLKGLMDT
ACHHAPSIQQLPAPLSNISEVQSSIMEELNNLTLVKDNAQTLIERKVSFEKTKKILAVPE
IQRQTEGNRTRVLDEYPADRLYQLKRNCNGCQEQDVSLLEGELVGLLEDTDPLGSRGRWL
VDTGSTQGYVYSSFLKQYNPNRDQGRPGQGTGITEPQQPIVVLDEDFDNLSLFVSGSGRN
NSIRSRSSIPNFSLYNTSSTSLDRCSTPSSLQGDTEPDIRQDVDTEPDNQQFYAVYGFQA
RCDQELTMQDNQHVRILKFSDLGGNKDWWLAEANGQKGYVPANYLGKMSYA
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggatcccaacaaggaggccaacaacggcagtgagaaagagaaggaaaaagagaaagtg
atcaagaggagaaccaggcctaatttcctgcgctacatgcacttggagaggaggaagacg
gacaccatcgtggtggccaacgatgacaccgccgctgatattaaaggtgacatcaacctt
gggaccctagtgcggaggagtcagtcggacaaaacggagtacagtgccaaacttaaagag
aaaatggcgcccttgtcccccctgtcgtcgatcctggcctccccggccctcgaccccgcg
gaggtccgcctgaggaagatgagccgcaggtcaaaggtcatccaggagctggtgcagacg
gagagggacttcctcaccgacctggagctctgcatcagagaggtggtcaagcccctcaga
gacagacaggtggtggacgtggatcgtctgtttactaacatggagacagtgtgtgaggtg
tcggccgcgctgctccaccggctgcaggaggccacagctgagccagaccctgaggcacta
gtcataggggaagtgttcattcaggccaaagcagcgctggaggacgtctataaaatctac
tgctatcaccacgacgacgctaactctttactcaagtcctatgagaaagaggaaggaata
aagcaacatttcatcacctgtgtgttatcactgaagcagatatacgaccaagagggtaaa
cccaacctgctggacatgggttctctgctcatcaagccggtccagcgggtcatgaagtac
cctctgctgctcggggagctgtggcaggccacgcccagcgaccaccctgacaacaggccc
ctccaggaggccctgaccgccgccaagatcatcaacgtcaacatcaacgagttcaagagg
aggaaggacatcgtgatgaagtacaagaggaccgaggaggatggggggacactcatgggt
aaactgaataagttcagcatccactctatcaggaagaagtctgacaggctcacaggatac
ctcaagatcctcacaggtgtggagccacaggtgagagatgaggtgttcgacaaggaggag
aagctgttcaggagtctggagaaagcagtgagacaactagtcaagaacgtccactgttac
ctgatacacatacaggagatggtaggtgtcgcggtccagaatgctgcagacctggaggac
atcatgaaggatccagacaaaatagacacaaacggtactcagcacctgaagaacggcaac
aacccatacaagcactttaaagagaggatggcacatctggtcctggcacccctctcctca
ctccaaggcatgttcgccgccccgcagaaactcatccagaaacgctacgacaaactattg
gactactgcagccgcctggagcgctctccctcctcctcctccacgtcttctgcctcttct
tcttcctcctctccatcacctgtatccgaggaccagggacaggttgcggcgcggagggac
tacgcagccctcaatgctcagctggtggaggagctgcagagattcaacatggccgcccat
actatcttgtccaactgtgtcctctgcctggtgaccctgctgaaaggcctgatggacacg
gcctgccaccacgcaccctccatacagcaactaccggctcctttgtccaacatcagtgaa
gtccaaagcagcatcatggaagagctcaacaacctgactctcgtcaaggacaacgcacag
actctaatagaacgcaaagtcagcttcgagaaaacaaagaaaatcttagctgtcccagag
atccagcgtcagacagagggcaacaggaccagggtgctggacgagtatccagctgacagg
ctgtaccagctgaagaggaactgtaacgggtgtcaggagcaggatgtcagcctgctggag
ggggagctggtgggcctgctagaggacacagaccctctggggagccggggccgctggctg
gttgacactggcagcacccagggttacgtgtactcatccttcctgaagcagtacaacccc
aacagggatcagggtcgaccaggtcagggtacggggatcacagagccccagcagcccatc
gtggtgctggacgaggactttgacaacctcagcctgtttgtgtcgggcagcgggaggaac
aacagcatacggagccggagcagcatacctaacttcagcctctacaacacctccagtacc
tcgcttgacagatgctccaccccgtccagcctacagggcgacacagagccagacatccgc
caggatgtggacacagagccagacaaccagcagttttatgcggtttacgggttccaggca
cgctgtgaccaggagctgaccatgcaggacaaccagcatgtgaggatcctcaagttcagc
gacctgggaggcaacaaggactggtggttggccgaggccaacggacagaagggctacgtc
ccagccaactacctcggcaaaatgtcatacgcataa
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