Salvelinus namaycush (lake trout): 120034907
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Entry
120034907 CDS
T07522
Symbol
vps37a
Name
(RefSeq) vacuolar protein sorting-associated protein 37A
KO
K12185
ESCRT-I complex subunit VPS37
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120034907 (vps37a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120034907 (vps37a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120034907 (vps37a)
Membrane trafficking [BR:
snh04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
120034907 (vps37a)
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120034907 (vps37a)
Exosomal proteins of colorectal cancer cells
120034907 (vps37a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mod_r
UEV
UQ_con
Motif
Other DBs
NCBI-GeneID:
120034907
NCBI-ProteinID:
XP_038837501
UniProt:
A0A8U0Q7C6
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All DBs
Position
Sna42:20054579..20062966
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AA seq
385 aa
AA seq
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MNWLFPLSKGSGPLPPLNSLQQQRQRQIESLKAAHSSLAEIQKDVEYRIPFTVNNSTISV
NILLPPQFPQEKPVVSVYPPVGHHLVDSNNGTMVTSPLITNFGMHSDLGKVIQSLLDEFW
KSPPVLTSGPTGFPYNMYKPSGMPPYPTQSFHYGLCPVGPTPPPMPHAGVEGAHGHCPPW
AAAPVYGLITDLPLPVPTADSQAGLNGHMYKMPEIPETFPELSEMSVSQLKDMSEQENVL
LELFVCLPQLKQVTTDKEELVNSIVDMAKKNLQLEPQLEGTRQEMLFKYEQLTQNKSAFE
TKMQRQHDISESCSLSALQARLKVAAHQAEEESEETAESFLEGKTDIDDFLANFMEKRTL
CHSRRAKEEKLQQSINTHGQFPSSH
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaactggcttttccccttatccaagggttccggacctctcccacctctaaatagcttg
cagcaacaaagacaacgacagatcgagtctctcaaagctgcccactccagcttagcagag
atccagaaagatgtggagtacagaatccctttcacagtcaacaactcaaccatcagcgtc
aacattttgcttccgcctcagtttccccaggagaaaccagtagtcagtgtgtaccctcca
gtaggacatcacctggtagacagcaacaatggcaccatggttaccagccccctcattacc
aattttggaatgcactcagatctgggcaaagtcatccagagtctcctggatgagttctgg
aagagtccaccggtcctgacgtctggccccaccggcttcccttataacatgtacaagccg
tcgggaatgcctccctaccccacacagagcttccactacgggctgtgccccgtgggcccc
acccctcctcccatgccccacgcgggtgtagagggagctcacggtcactgccctccctgg
gcagcagcccctgtctacggcctcatcaccgacctgcctctccccgtacccaccgcagac
tcccaggctgggttgaacggccacatgtacaagatgcctgagattcctgaaacatttcct
gagctgtctgaaatgagtgtgtcccagctgaaggacatgagtgagcaggagaacgtgctg
ctggagttgtttgtgtgtctgccccagctcaaacaggtcaccactgacaaggaggagctg
gtcaacagcatcgtggacatggccaagaagaacctgcagctggaacctcagctggagggg
acaagacaagaaatgctgttcaagtacgagcagctaacccagaacaaatcggcctttgag
accaagatgcagagacagcatgacatcagtgagagctgcagcctgagtgccctgcaggct
cgtctgaaggtggcagcccaccaggcggaggaggagtcagaggagacggccgagagcttc
ctggagggcaagacggacatcgacgacttcctggccaacttcatggagaagaggacgctc
tgccacagcagaagggccaaagaggagaagctgcaacagtccatcaacacacacggacag
ttccccagcagccactga
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