Salvelinus namaycush (lake trout): 120034924
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Entry
120034924 CDS
T07522
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 4-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00061
Fatty acid biosynthesis
snh00071
Fatty acid degradation
snh01100
Metabolic pathways
snh01212
Fatty acid metabolism
snh03320
PPAR signaling pathway
snh04146
Peroxisome
snh04216
Ferroptosis
snh04920
Adipocytokine signaling pathway
Module
snh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
120034924
00071 Fatty acid degradation
120034924
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120034924
09143 Cell growth and death
04216 Ferroptosis
120034924
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
120034924
03320 PPAR signaling pathway
120034924
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
snh01004
]
120034924
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120034924
Enzymes [BR:
snh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
120034924
Lipid biosynthesis proteins [BR:
snh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
120034924
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of breast milk
120034924
Exosomal proteins of breast cancer cells
120034924
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
120034924
NCBI-ProteinID:
XP_038837545
UniProt:
A0A8U0U334
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All DBs
Position
Sna42:complement(19135515..19154802)
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AA seq
711 aa
AA seq
DB search
MGLHQSELHSLFLLPLHLVVWLYSLLSFLPWYYLTRAGEKRTQATRVKARSTSGHFEGPY
RCVDRFQSLATEDFPGKDTLDKLFQQAVQRFGDSDCLGTREVLSEENEPQPSGKVFKKLI
LGKYCWLSYQQVDSVVSYMGSGLAALGQQPKSMVAIFCDTRAEWMISAQACFRYNFPLVT
FYATLGEEAVVFGLNETGVTHLITSAELLETKLKGVLSQIPKLKHIISVDQRRVSTEGYP
PGLAIHSMASVQELGSQPDNLARPVVSPQPSDLAVVMYTSGSTGRPKGVMVVHSNLTAGM
TGQCERIPGLGPKDTYIAYLPLAHVLEMTAEISCMAYGCPIGYSSPQTLSDQSTKIKKGS
RGDSSVLKPTLMAAVPEILDRINKNVMSKVGEMSYIQRTLFNLGYNYKLEQVKRGYDAPL
CNVLLFSKVRKLLGGRVRLMLSGGAPLSSATQRFMNICFCCPVGQGYGLTETCGAGTITE
VADNSTGRVGAPVICCEIRLRDWLEGGYTNQDKPHPRGEILIGGPNITMGYYRNESNGQD
FFVDEKGQRWFCTGDIGEIHPDGCLQIVDRKKDLVKLQAGDYVSLGKVEAALKNCSLIDN
ICAYANSEQNYVISVVVPNQKMLTELARQRGVKGSWEEVCTHPAMEKEVLKEIKEVATSI
KLQRFEIPVKVHLSPEPWTPETGLVTDAFKLKRKELKNHYLQHIERMYGRP
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgggtctccaccaatcagagctccactccctgttcctcctccccctccacctcgtggtg
tggctgtactccctcctttccttcctgccctggtactacctcaccagggctggggagaag
agaacccaggccacacgggtcaaggctcgctccacctccggccacttcgaggggccgtac
cgctgtgtagaccgcttccagagcttggccacagaagacttccctgggaaagacacgctg
gacaaactgttccagcaagccgtacagcgctttggggactctgactgtctagggacaaga
gaggtactgagtgaggagaatgagccccagcccagcggaaaggtctttaagaagctgatt
ctggggaagtactgctggctgtcctaccagcaggtagactctgtagtgagttacatgggc
agtgggttggcagcactgggccagcagcctaagagtatggttgccatcttctgtgatacg
agagctgagtggatgatctctgctcaggcctgcttcagatacaacttcccattggtgacg
ttctatgcgacactgggagaggaggcggtggtgtttggactgaacgagacgggagtcaca
cacctcatcaccagcgcagaactactggagaccaaactgaagggtgttctctctcagatc
cccaagctgaaacacatcatctctgtagaccagaggagggtcagtacagagggataccca
cctggtctcgccatccacagcatggcatcagtacaggagctggggtcacagcctgacaac
ttggctaggccggtggtgagtcctcagccatcagacctggctgtagtgatgtacaccagt
ggttctacaggcagacccaaaggagtcatggtcgtccacagcaacctcaccgctggaatg
accggacagtgtgaacgcatccctggcctggggcctaaagacacctacatagcctacctg
cctctggcccatgttttggaaatgacagcagaaatctcttgcatggcgtacggctgtccc
atcggttactcctcccctcagacactctctgaccagtccactaagataaagaaaggaagt
agaggagacagctctgtgctgaaaccaactctaatggctgctgtaccggaaattctggac
cgcatcaataagaatgtgatgagtaaggttggggagatgagttacattcagaggacgctg
ttcaacctgggatacaactacaaactggagcaggtcaagaggggttacgatgctcctctc
tgcaacgtgctgctgttcagtaaggtgcgcaagttgctgggcggcagggtgaggctgatg
ttgtctggaggggctccgctttcctctgccacacagaggtttatgaacatatgtttctgc
tgtcctgtgggccaggggtacggactgacggaaacctgtggagctggcaccatcaccgag
gtggcagacaacagcacgggtagagttggagctcctgtcatctgctgtgagatccgactc
agggactggctggagggaggctacaccaatcaggacaaacctcacccccgaggggagatt
ctgattggagggcctaacatcactatgggttactataggaacgagagtaatggccaggac
ttctttgtggacgagaagggtcagaggtggttctgtacaggagacataggagagatccac
cctgacggatgtctgcagatagtggatcgtaagaaggatctagtgaagctccaggctggg
gattacgtctctctggggaaagtagaagctgctctgaagaactgctccctcatcgacaac
atctgtgcttatgctaacagtgagcagaactatgtgatcagtgttgtggtacccaaccag
aagatgttgactgagctggctagacagaggggagtgaaagggagctgggaggaggtgtgc
acccaccctgccatggagaaggaggtgctgaaggagatcaaagaggtggccacttcaatt
aaactacagaggtttgagatcccagtcaaggtacacctcagcccagagccctggacccct
gagacaggactggtgactgatgccttcaagctgaagagaaaagagttaaagaaccactat
ctccaacacatagagaggatgtatgggaggccgtaa
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