Salvelinus namaycush (lake trout): 120034934
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Entry
120034934 CDS
T07522
Symbol
vps37c
Name
(RefSeq) vacuolar protein sorting-associated protein 37C isoform X1
KO
K12185
ESCRT-I complex subunit VPS37
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120034934 (vps37c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120034934 (vps37c)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120034934 (vps37c)
Membrane trafficking [BR:
snh04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
120034934 (vps37c)
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120034934 (vps37c)
Exosomal proteins of colorectal cancer cells
120034934 (vps37c)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mod_r
CDV3
Motif
Other DBs
NCBI-GeneID:
120034934
NCBI-ProteinID:
XP_038837564
UniProt:
A0A8U0U236
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Position
Sna42:6590845..6600506
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AA seq
356 aa
AA seq
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MDKLQDLSQSELEDLLDNTERVESMALESDEIQNIQLEREMALASNRNLAEQNLDMKPRL
ERQREHLVERYSELEGVRETYRQHCDQKDGIMGQVSPEGLFSRLQTEGASTETESESLAD
EFLDGQLSLDSFLDRFLSLRSLAHKRRVRIEKLQEILRQKKETATGEAGSMTSQTSANQD
PATTQSSPWNHHQAPQQQQPQQNSNLNNHSSFQNPSSQNGPGSALPYTPYPVSPPNPTAT
SAVSGPGPSIPPGQFPPYPSPGSPFTPAAGYTSRPAFGPPANACPYPTQPTFPGVPGSGS
AFGQYSAPNSAPYPSAYPYGGVEGYSYPTGPALPNSQSPTGRPLYRPGFGVPQPYS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggacaagcttcaggacctcagccaatccgagttggaggatttgctggacaatacagag
cgggtggagtccatggcattggaatctgatgagattcagaacatccagctggagagggag
atggcactggcctccaaccgtaacctggcagaacagaacctggacatgaagcctcgcctg
gagagacagagagaacatctagtggagagatactctgaactggagggagtcagagagacc
tacagacaacactgtgaccagaaagatggcatcatggggcaggtatcaccagaggggttg
ttctccagactccagacagagggcgccagcacagagacggagtcagagagtctggcagat
gagtttctggacggccagctgtcgctggactcgttccttgaccgcttcctctccctccgc
tccctcgctcacaaaagacgagtgcggatagagaaactgcaggagatcctgcgccagaag
aaagagaccgccaccggtgaagccggctccatgacatcacaaacaagcgccaatcaggac
ccagcgacaacacagtcatcgccatggaatcatcatcaagctcctcagcaacaacaaccg
cagcagaattccaatctcaacaatcactctagtttccaaaacccctcttcccaaaatggc
cccggctccgccctaccttacaccccttaccccgtctcccctcctaacccaacagccact
tccgcagtatcaggaccaggcccgtccattcctccaggtcaatttcctccctaccccagc
cccggctcacctttcaccccagcggcgggctacacatcccgccccgctttcgggcctccg
gccaatgcctgcccgtaccccacccagcccacgttccctggcgtccccggctcagggtct
gcgttcgggcagtacagcgcccccaacagcgccccctacccctctgcgtacccttacggt
ggggttgaggggtatagctaccccacgggccccgctctgcccaactctcagtcccccaca
ggcaggccgctctacaggcccgggtttggagtgccacagccctactcctga
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