Salvelinus namaycush (lake trout): 120035006
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Entry
120035006 CDS
T07522
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 4-like isoform X1
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04114
Oocyte meiosis
snh04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
120035006
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
120035006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120035006
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120035006
Factors involved in mRNA localization
Trans-acting binding proteins
120035006
mRNA cycle factors
P-body specific factors
120035006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
zf-U1
Motif
Other DBs
NCBI-GeneID:
120035006
NCBI-ProteinID:
XP_038837673
UniProt:
A0A8U0U3M1
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Position
Sna42:complement(19268910..19287443)
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AA seq
741 aa
AA seq
DB search
MDDYGFGVLVKNNGSGNKSAFPVRIPPHLQPQPPHLNHPANPPSPPSFVNSTSATNGGGS
AWLFPSVTPHSNMQDEILDSDKSNALDRQDLQEKAQPQALSPGQQEAGGGLGELDGILSE
DGSMEKGSLETGGKEKLRGGMDSPPVLGGFDYQDSLGMGTSGAQSTTTSSSLTSFNNWSP
TIPSNPSPVIGEDVGGGFFGPAGSNANGPQMLFQNFSHHAGPGFGGAGGSFSPQIGPVSQ
HHPPPHHYHPHNQGVPPQHRRSPASPHPPQPSFPPHPHRSGAFTQLPHLAPAQSKPPSPW
GSYQSPAPPTSTSWSPGGGGYGGWGGSQGVREYRRGLNGGVTALNSISPLKKSFPNNQVP
SQKYPRNNSGFNQKAWMEDSMSRTDNFPFQQERTRSFDGFSMHSLENSLIDIMRAEQDSL
KGRYGFSHQAGDGSLPMNGHSNLFPMEDERSFGEDESGDQGLPGLGSAHCFPHLNGERVE
RYSRKVFVGGLPPDIDEDEITASFRRFGHLFVDWPHKAESKSYFPPKGYAFLLFQDESSV
QALIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLNDSDFVMDGSQPLDPRKTIFVGGVP
RPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQH
GEIDKRVEVKPYVLDDQLCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGRE
FHKPLVKEGGDRPRHISFRWN
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggacgactacggcttcggagtcctggtgaagaataacggcagtggcaacaagtctgct
ttccccgtgaggatcccccctcacctccaaccccagcccccccacctcaatcaccctgcc
aacccccccagccccccttcattcgtcaacagcacctcggccaccaatggaggaggtagc
gcctggctgttcccctccgtaacaccccacagtaacatgcaggatgagatccttgactcc
gacaagtccaacgccctggaccgccaggacctgcaggagaaggcccagccgcaggccctc
tcccctgggcagcaagaggccggaggtggcctaggggagctggatggaatcctatccgag
gacggctccatggagaagggctcgttggagaccggtgggaaggagaagcttaggggtggg
atggactctcctccggtgctgggggggtttgactaccaggatagcctggggatggggacg
tccggagcccaatccaccaccacctcctcctccttgacctccttcaacaactggtccccg
accataccttccaacccctcccccgtaatcggtgaggacgtcgggggtgggttctttggc
ccggctggttccaacgctaacggaccccagatgctgttccagaacttctcccaccacgcg
gggcccggcttcggaggggcggggggcagcttctccccccaaatcggcccggtctcccag
caccaccctcctccccaccactaccacccccacaaccagggggtcccccctcagcaccgt
cgctctccagcctccccccaccctccccagccctccttccctcctcacccccaccgctct
ggagctttcacccagctgccccacctggccccggcccagtccaagcccccctccccttgg
ggcagctaccagagccctgccccccccacttccacctcctggagccccgggggaggtggg
tacggtggctggggagggtcacagggggttcgtgagtatcgcaggggcctcaatggaggc
gtgacggccctcaactccatctcaccacttaagaagtctttccccaacaaccaggtgccc
tctcagaagtatcctcgtaataactctgggttcaaccaaaaggcctggatggaagacagc
atgagtcgcactgacaacttccctttccagcaggagagaacccgttcctttgatggcttc
agcatgcactctctggagaacagtctgattgatattatgagggctgaacaggattccttg
aaaggtcgctatggtttctctcaccaggccggagatgggtctttgcccatgaatggtcac
tctaacctgttccccatggaggacgagcggtccttcggagaggacgagtcaggtgaccag
ggacttcctggtttaggatccgcccactgtttcccgcacctcaacggagagcgagtggag
agatactcacgcaaggtgtttgtgggaggactgccccccgatatagacgaagatgagatc
actgccagtttccgccggttcggtcacctgtttgtcgattggccccacaaggctgagagc
aagtcctatttcccacccaaaggttatgcattcttactgttccaagacgagagctctgtc
caggctctgatcgatgcctgtatcgaggaggatggcaagctctacctctgtgtctccagc
cccaccatcaaggacaagcctgtccagatccgtccctggaacctgaacgacagtgacttt
gtgatggacggctctcagcctctggacccgaggaagaccatcttcgtagggggggtgcca
cgtcctctacgcgcagtggagctggccatgataatggatcgtctgtatggaggagtgtgt
tacgctggcatcgacacagaccctgagctgaagtaccctaaaggagcgggccgtgtggcc
ttctccaatcagcagagctacatcgctgctatcagcgctcgattcgttcagctgcagcac
ggcgagatcgacaaacgggtggaagtgaagccatacgtgctggatgaccagctgtgtgat
gagtgccaggggacacgctgtgggggaaagttcgctcccttcttctgcgctaacgtcacc
tgtctccagtactactgcgagtactgctgggcagccatacactcccgtgccggacgagag
ttccacaagccactggtcaaggaggggggagaccggccccgacacatatccttcaggtgg
aattag
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