Salvelinus namaycush (lake trout): 120035015
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Entry
120035015 CDS
T07522
Name
(RefSeq) PDZ and LIM domain protein 3-like isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120035015
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120035015
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
120035015
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
120035015
NCBI-ProteinID:
XP_038837687
UniProt:
A0A8U0Q6T8
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Position
Sna42:5866390..5892770
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AA seq
351 aa
AA seq
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MSKSSRCSVSENPAVFGTHTSVLPATGTETRDKEGDMPLDIVLNGPAPWGFRLTGGKDFN
QPLTISRITPGSKAAVANLCPGDVILAIEGIPAEDMMHCEAQNKIKDAIYQLILTVQRPE
TRLWSPQVTEDGKANPFKINLEAEQQEFKPIGTGHNRKAQPFIAAANIDDHRQVVSTAYN
TPIGLYSSGNIQDAMHGQMRGLVQDKPEGSKTLTSIEESDVYRMLLKDQEEPQEPRQSGS
FKALQDFVDSDGTRPMVTRTVRAPMTKPPPPTGNLQKLPLCDKCGNGIVGTVVKARDKFR
HPSCFVCTDCDVNLKQKGYFFVEGQLYCETHARARTRPPEGHDLVTAFPSA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagtcgtcccgctgctctgtttctgagaacccggctgtgtttgggacacacacc
agtgtacttccagctacaggaacagagacaagggacaaagagggggacatgccactggac
attgtcctaaatggcccggccccgtgggggttccgactgaccggcggcaaggacttcaac
cagcccctcaccatctccaggatcactccgggcagtaaggcagcggtggccaacctgtgt
cctggtgatgtcatcctggccatcgagggcatcccggcggaggacatgatgcactgtgag
gcccagaacaagatcaaagacgccatctaccagctcatcctcaccgtccagagaccagaa
accaggctatggtcgcctcaagtcacggaagacgggaaagccaacccgttcaaaatcaac
ttggaggctgagcagcaggagttcaaacccattggtacaggtcacaaccgcaaggcccag
ccctttatagctgcagctaacatcgacgaccatcgtcaggtggtcagcacagcctacaac
acccccataggcctctactcctcaggcaacatccaggacgccatgcacggacagatgagg
ggcctggtccaggacaagccagagggtagcaagacgctgacctccatcgaggagtctgat
gtgtaccgcatgctcctgaaagaccaggaggagccccaggagccccggcaatcaggttcc
ttcaaggccctgcaggactttgtcgacagtgacggcactcgccccatggtgacgaggaca
gtgagagcgccaatgactaagccaccaccgcccacaggaaacctgcagaaactgcccctg
tgtgacaagtgtggaaacggcattgtgggcacagtggtgaaagcgagagacaagttccgc
caccctagctgcttcgtgtgcaccgactgtgacgtcaaccttaaacagaagggctacttc
ttcgtggagggccaactgtactgcgagacccacgctcgagcccggacaagacccccggag
ggccatgaccttgtcactgctttcccctcggcatag
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