Salvelinus namaycush (lake trout): 120035020
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Entry
120035020 CDS
T07522
Name
(RefSeq) U7 snRNA-associated Sm-like protein LSm11 isoform X1
KO
K25592
U7 snRNA-associated Sm-like protein LSm11
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120035020
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
120035020
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GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
120035020
NCBI-ProteinID:
XP_038837696
UniProt:
A0A8U0Q7P6
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Position
Sna42:19632233..19634327
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AA seq
379 aa
AA seq
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MSAFVLNMEERERRGDKQQKCPESEKKERESTSACASDATEHTAEEDDDIAAKLDVTSDK
FDPLLALYSATVPLPYPNVKCFNNIAEYESFLKGGRGRAKPENVEKKQRKARKGVADPER
IEKLKRLMVNNPIEGEDGEEGTSGTARRCRIQKAPKNVLTRMPLHTGSPLGELHRCVQER
IRVKVHIRTFKGLRGVCSGFIVAFDKFWNMAMVDVDETYREPLLGEALYHEKALTVTRLF
DKLKLQESAALRECEEKKQIDKRKAEPLHPPPETQTRDSRRRDPNRGDPRRRGDPRAVDP
RLARATVGPPVGDDPGALGATGKTQGSNVKGQESGTEGPKRTGSQKKEVSQPYGRVHTRH
VNQLFIRGENVLLVNLQPL
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcatttgttttaaacatggaggagagggaaagaagaggagataaacaacaaaaa
tgtccagaatcagaaaagaaagagagagaatcaacaagtgcatgtgcttcagatgcaacc
gaacatacggcagaagaagatgatgatatcgcggcaaagttggacgtcacctccgataaa
tttgatccactcctggcgctatactcggctactgtgcctcttccatacccaaacgtgaaa
tgcttcaacaacatagccgagtatgagagctttctaaaggggggacggggccgcgccaag
ccggagaacgtggagaaaaaacagaggaaagccaggaaaggtgtagcggatccggagagg
atagagaaactgaagaggttgatggtgaacaacccgatagagggagaagatggagaggag
gggaccagcggcactgcccgccgttgtagaatacagaaggctcccaagaatgtcctgacc
aggatgcctctccatacaggaagtcctctgggggagctgcaccgctgcgtgcaggagagg
atcagggtgaaagttcacatcagaaccttcaaggggctccgtggagtgtgttctggcttc
atagtggccttcgacaagttctggaacatggcgatggtagatgtagatgagacctacagg
gaacctctgctgggtgaagctctctaccatgagaaggccctcactgtcacacggctcttt
gacaagctgaaactccaggagagtgcggcgctgagagaatgtgaggagaagaagcagata
gacaagaggaaagctgaacccctccatcccccgcctgagacccaaaccagagacagcaga
cgacgggaccccaatagaggggaccccagaaggagaggagaccctagggcagtggacccc
cgacttgcaagggccacagttgggcccccagtgggcgatgaccccggagccctaggggcc
acaggtaagacccaggggtcaaatgttaaaggtcaggagtcagggactgaggggcccaag
agaacagggtcccagaagaaagaagtgtcccagccctacgggagggttcacacgcgccac
gtcaaccagctcttcatacggggagagaacgtgcttctagtcaacctacaaccactctga
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