Salvelinus namaycush (lake trout): 120035090
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Entry
120035090 CDS
T07522
Name
(RefSeq) catenin alpha-2 isoform X1
KO
K05691
catenin alpha
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04520
Adherens junction
snh05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120035090
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120035090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120035090
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120035090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
PipB2_N
Motif
Other DBs
NCBI-GeneID:
120035090
NCBI-ProteinID:
XP_038837788
UniProt:
A0A8U0Q7A9
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Position
Sna42:complement(2212721..2883925)
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AA seq
905 aa
AA seq
DB search
MTTATSPILLKWDPKSLEIRTLTVERLLEPLVTQVTTLVNTSNKGPSSKKKGRSKKAHVL
ALSVEQATQNFLEKGEQIAKNSHDLKEELILAVEDVRKQGDSMRVASQEFADDPCSSVKR
GTMVRAARALLSAVTRLLILADMADVMRLLAHLKIVEEALEAVKNATNEQDLANRFKEFG
KEMVKLNYVAARRQQELKDPQCRDEMAAARGALKKNATMLYTASQAFLRHPDVAATRANR
DYVFKQVQEAIGGISSAAQATSPGDEKHGHAGIGELAAALNEFDNKIILDPLTFSEARFR
PSLEERLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMNNTGRKEKGD
PLNSAIDKMTKKTRDLRRQLRKAVMDHISDSFLETNVPLLVLIEAAKSGNEKEVKEYAQV
FREHANKLVEVANLACSISNNEEGVKLVRMAATQIDSLCPQVINAALTLAARPQSKVAQD
NMDVFKDQWEKQVRILTEAVDDITSVDDFLSVSENHILEDVNKCVIALQEGDVDTLDRTA
GAIRGRAARVVHIINAEMENYEPGVYTERVLESIKLLSETVMPRFAEQVEVAIEALSTNP
PQPFEENEFIDASRLVYDGVRDIRKAVLMIRTPEELEDDSDFEQEDYDARSRTSVQTEDD
QLIAGQSARAIMAQLPQEEKAKIAEQVESFRQEKCKLDAEVAKWDDNGNDIIVLAKQMCM
IMMEMTDFTRGKGPLKNSSDVINAAKKIAEAGSRMDKLARAVADQCPDSACKQDLLAYLQ
RIALYCHQLNICSKVKAEVQNLGGELIVSGLDSATSLIQAAKNLMNAVVLTVKASYVAST
KYAKVYGAAAVNSPVVSWRMKAPEKKPLVKREKPEECQTRVRRGSQKKHISPVQALSEFK
AMDSF
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgctacgtcccccatcctgttgaaatgggaccccaagagtctggagatccgc
accctgaccgtggagcggctgctggagcccctggtcacacaggtgaccaccctggtgaat
accagcaacaaagggcccagcagtaagaagaaggggcgctccaagaaggcccacgtgctg
gccctgtccgtggagcaggccacgcagaacttcctggagaagggcgagcagatcgccaag
aacagccacgatctcaaggaggagctcatcctcgccgtggaggatgtccgcaagcaaggt
gattcaatgcgcgtggcctcccaggagtttgctgacgacccttgctcctcggtgaagcgc
ggcaccatggtgagggctgcccgcgccctgctctccgccgtcacccgcctgctcatcctc
gccgacatggccgatgtcatgaggttgctggcccacctgaaaatcgtggaggaggccctg
gaggcagtgaagaatgccaccaacgagcaggacctcgccaaccgcttcaaagagtttggc
aaggagatggtgaagctcaactatgtggctgcccgcagacagcaggagctgaaagaccct
cagtgccgggacgaaatggcggctgcgcgcggcgccctgaagaagaacgccaccatgctc
tacacggcctcgcaggccttcctgcgccacccggacgtggcggccacgcgcgccaaccgc
gactacgtcttcaagcaggtgcaggaggccatcgggggcatcagcagtgccgctcaggcc
acctcgcccggcgacgagaagcacggccacgccggcatcggcgagctggccgcggccctc
aacgagtttgacaacaagatcatcctggacccgctgacgttcagcgaggcacgtttccgc
ccctccctggaggagcgcctggagagcatcatcagtggcgccgccctcatggccgactcg
tcctgcacccgcgacgaccgtcgcgagcgcatcgtggctgagtgcaacgccgtccggcag
gccctgcaagacctgctgagcgagtacatgaacaatactggcaggaaagagaaaggagac
ccgctgaactctgccatcgacaagatgaccaagaagaccagggacctgcgcagacagttg
aggaaggcggtgatggaccacatctcagactcgttcctggagaccaacgtgccgctgctg
gtgctcatcgaggcggccaagagtggcaacgagaaggaggtcaaggagtatgcgcaggtg
ttccgggagcacgccaacaagctggtcgaggtggctaacctggcctgctccatctccaac
aacgaggagggtgtgaagctggtgcgaatggctgccacccagatcgacagcctctgccca
caggtgatcaatgcggccctcaccctggctgctcggccccagagcaaggttgcccaggac
aacatggacgtgttcaaggaccaatgggagaagcaggtgcgcatcctcaccgaggccgtc
gacgatatcacttctgtggatgacttcctgtccgtgtcagaaaaccacattctggaggac
gtgaacaagtgcgtgatcgccctgcaggaaggcgacgtggacaccctggaccgcacggcg
ggcgccatcaggggtcgggcggcccgcgtcgttcacatcatcaacgcggagatggagaac
tacgagccaggcgtttacaccgagcgcgttctggagtctatcaagctgctgtctgagacg
gtcatgccccgtttcgctgaacaagtggaggtggccatcgaggcgctgagcacaaacccc
ccacagcccttcgaggagaacgagttcatcgacgcgtcccgcctggtctacgacggcgtg
cgtgacatacggaaagccgttcttatgatcaggacacctgaggagctggaggatgactca
gactttgagcaggaggactacgacgcccgcagcaggaccagcgtccagacagaggacgac
cagctcatcgccggacagagcgccagggccatcatggcccagcttcctcaggaggagaag
gcgaagatcgccgagcaggtggagagcttccggcaggagaagtgcaagctggacgccgaa
gtggccaagtgggacgacaatggcaacgacatcatcgtccttgccaagcagatgtgcatg
atcatgatggagatgacggacttcaccagaggcaaagggcccctgaagaactcctctgat
gtcatcaacgccgccaagaagattgcagaggcaggctccaggatggacaaactggcccgc
gctgtcgccgaccagtgccctgactcggcctgcaagcaggacctgctggcctacctgcag
agaatcgccctgtactgccaccagctcaacatctgtagcaaggtcaaggccgaggtccag
aacctgggaggagagctcatcgtctctgggctggacagcgccacctccctgatccaggcg
gccaagaacttgatgaacgctgtggtgctcacagtcaaggccagctacgtggcgtccacc
aagtacgccaaggtgtacggcgccgctgccgtcaactcgcctgtggtcagctggcgcatg
aaggcgcccgagaagaagcccttggtgaagcgggagaagcccgaggagtgtcagacgcgc
gttcgacggggctcgcagaagaagcacatctcgcccgtccaggcccttagcgagttcaag
gccatggactccttctaa
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