Salvelinus namaycush (lake trout): 120035094
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Entry
120035094 CDS
T07522
Name
(RefSeq) vascular endothelial growth factor C-like
KO
K05449
vascular endothelial growth factor C/D
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04020
Calcium signaling pathway
snh04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120035094
04020 Calcium signaling pathway
120035094
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120035094
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
snh04052
]
120035094
Cytokines and neuropeptides [BR:
snh04052
]
Cytokines
Growth factors (RTK binding)
120035094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
CXCXC
Motif
Other DBs
NCBI-GeneID:
120035094
NCBI-ProteinID:
XP_038837797
UniProt:
A0A8U0Q6K0
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Position
Sna42:10103362..10163840
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AA seq
407 aa
AA seq
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MHLFGISVLLANSAILYANLASEASHEFSHDYNDYDQDQGDEPEPSEPDLEQQLRSVASV
DELMRIVYPNYYSVLSCRSKRGARFTLRGEHTATETRSSDELPAFASFNPDTLKSIVSEW
KKTQCMPREVCLDVGKEFGAATNTFYKPPCVSVYRCGGCCNSEALQCMNISTSYISKTLF
EITVSSRTINNLVTISFANHTVCNCLSKLDAYRQVHSIIRRSLPECLVANKTCPKNHSWS
NRLCRCMAVQRDTPPSPQTQHSDSFEADVCGSDKELDEETCQCVCRRQLRASGACGPQRY
LDKNTCQCVCKTLPSSCGPHQLFNKDTCQCSCARTCPKHQPLNRTKCACECNESPNRCFL
KGKRFHQATCSCHRPPCDVRRNRRCASGFYFSEEVCRCVPTYWRGQD
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgcacttatttggaatatctgttctccttgccaattcagcgattctctacgcaaatcta
gccagtgaagcgagtcatgaattcagtcatgattataatgattatgatcaggatcaaggg
gatgaaccggagccgtcggagccagaccttgagcagcagctgcgctccgtggccagtgtt
gacgaactgatgaggatagtgtaccctaactactacagcgtgctcagttgccggtcaaag
cggggcgcacgcttcaccctgagaggggaacacacagccacggaaacgcggtcgagcgac
gaactgccggcgttcgcttccttcaaccctgacacactgaaaagtattgtgtcagagtgg
aaaaagacccagtgcatgccacgagaagtttgtttagatgtggggaaagagtttggggcg
gctacaaacaccttctataaaccaccctgcgtgtctgtctacagatgtgggggctgctgc
aacagcgaggcgctgcagtgtatgaacatcagcacctcctacatcagcaagacgctgttt
gaaatcacagtttccagcagaacaattaacaacctagtgactatcagctttgccaaccac
accgtgtgcaattgtctgtccaaactggacgcctacagacaagtacactccatcatacga
cgatctctaccagaatgcctggtagccaataaaacctgcccaaagaaccacagctggagc
aaccgcttgtgcagatgtatggcggtgcaacgcgacacccctccctcgccccagacacaa
cactcggactcgtttgaagcagatgtctgcgggtcagataaggagttggacgaggagacg
tgccagtgtgtttgcagacgacagcttcgggcctcgggcgcatgcggaccccaacgctac
ctggataagaacacgtgccagtgtgtgtgtaagacgctcccatcgtcctgtgggccgcac
cagcttttcaataaagacacgtgccagtgctcctgcgccaggacgtgccccaagcaccag
ccgctcaaccgcaccaagtgtgcctgcgagtgcaacgagtcacccaacaggtgcttcctg
aaaggcaaaaggttccaccaggccacctgcagttgccacagaccaccgtgtgacgtacgg
aggaatcgacgctgtgcatcaggtttttacttcagtgaggaggtctgccgttgcgtacca
acatactggagaggacaggattaa
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