Salvelinus namaycush (lake trout): 120035175
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Entry
120035175 CDS
T07522
Name
(RefSeq) hedgehog-interacting protein-like
KO
K06231
hedgehog interacting protein
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120035175
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Motif
Pfam:
GSDH
EGF_TEN
EGF_2
EGF_Teneurin
JAG1-like_EGF2
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
120035175
NCBI-ProteinID:
XP_038837926
UniProt:
A0A8U0Q4Z6
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Position
Sna42:complement(15008183..15056124)
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AA seq
697 aa
AA seq
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MRHLKFVLVLAIAVNVWECGDSKFGEKGEISPRRRRCYDGSMPKRLKKRERKLSVDSGAS
SGEVCHRLYPRVSCCPTRRAAYQIVHRRDARIFSTNNTECSRLLEEIKCAHCSPNAQVLF
HSPESDKVPLREPHLPRLCQDYCREFYYTCRGHIPELFQADVDEFCQYYGRRDGGLCFPD
FHRKQTRGQDSNYLGDEKVEDINRKHKHNCYCAQVVLSGLRQPVAVVHCGDGSQRLFVLE
KEGFVRVLTHNMELLKEPFLDIHKLVQTGLKAGDERGLLGLTFHPNYKKNGKLYVSYTTN
QERWAIGPHDHILRVVEYTVSRKNPNLVDSRTTRMLIEVAELHRKHLGGQLLFGPDGLLH
IVLGDGMITLDDMEEMDGLSDFTGSVLRVDVDTDCCTAPYSIPRNNPYFNSTNQPPEIFA
HGLHDPGRCAVDRHHTDNNGSLLILCTDASGRNASAGRILAITKGKDYENEASIIDLATS
GGAAPVGGFIYRGCQSRRLYGSYVFGDKNGNLRILQKGSAAARDQWQEKALCLGTSSSCG
SALVGHILGFGEDQLGEVYILATSKSMAQSHSGKLYKLVDPKRPAVPKECQRQVEAPELL
GTACSRQCKNGHCTPTGKCCCSTGWEGPFCRVAKCEPACRNGGVCVEPHNCLCKSGYSGA
QCEKGERGMPSDQETDGILDHIIDMTSYLLNLTSYMV
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaggcatttgaaatttgtactcgtgttggctattgcagtcaacgtttgggaatgtggg
gattcgaaatttggcgagaagggggaaataagcccgaggagaaggagatgttacgacggg
agcatgcccaagcgactgaagaagagggaacgaaaactgtcagtggacagcggtgcaagc
agcggggaagtttgtcacaggttgtaccctcgtgtgtcatgctgcccaaccaggcgtgct
gcttatcagatagtccaccggcgtgatgccaggatcttctccaccaataacacggagtgc
agccgtctcctagaagagatcaagtgtgcacactgttcgcccaacgcccaagtgctgttc
cactcccccgagtcggacaaggtccccctcagggagccccacctgccacgcctctgccag
gactactgccgagagttctactatacctgccgcggacacataccagagctgttccaagcc
gatgtggatgagttctgtcaatactacggacggagggacggaggcctgtgcttcccagat
ttccaccgaaagcaaacacggggacaggactccaactacttgggagatgagaaagtcgaa
gacatcaacaggaagcacaagcacaactgctactgtgcccaggtggtgttgagtgggctg
aggcagccagtagctgtggtgcactgtggggacggatcccagcgcctctttgtcctggag
aaggagggcttcgtccgggtgctgacccataacatggagctgctgaaggagcctttcctg
gacatccacaagctggtgcagaccggactcaaggcaggagatgaaaggggtctgctaggt
ctcacattccaccccaattacaagaagaacggcaagctgtacgtctcctacaccaccaac
caggagcgctgggccatcggaccgcacgaccacattctgcgcgtggtcgagtacaccgtc
tccaggaaaaacccgaacttggtggacagtaggaccacgcggatgctgatagaagtggca
gagctgcataggaagcacctgggaggacagctgctgtttggccctgacggcctgctgcac
atcgtcctgggagatggcatgatcaccctggacgacatggaggagatggacggcctcagt
gatttcacagggtctgtgttgagggtggacgtggacacagactgctgcacggctccctac
tccatacccaggaacaacccctacttcaacagcaccaaccagccaccagaaatatttgcc
cacggactgcatgacccaggcaggtgtgccgtggaccggcatcatacggataacaacggg
agtctcttgatcctgtgcacggacgccagcggtaggaacgcgtcagcagggagaatactg
gcgatcactaaggggaaagactacgagaacgaggcgtccatcattgacctggcgaccagt
ggaggagcagcacctgtgggagggttcatctacagaggctgtcagtccagaaggctctac
gggagctatgtgttcggagacaagaacgggaacctgcggatcctccagaagggctcagcg
gcggcgagggaccagtggcaggagaaagctctgtgtctggggaccagcagctcctgtggc
tccgctctggtgggacatatcctgggctttggagaggaccaactaggtgaagtgtacatc
ctggccaccagtaaaagcatggcacagtcacacagtgggaagctctacaagctagtggac
cctaaaaggcccgcggtccctaaggagtgtcagagacaggtggaggccccggagctgctg
ggaacggcctgctcacggcagtgtaagaacggacactgcacccccaccgggaagtgttgc
tgcagcaccggctgggagggacccttctgcagagtggctaaatgcgagccggcctgtcgt
aacggaggcgtgtgtgttgagccccacaactgcctgtgtaagagtggctactcgggcgcc
cagtgtgagaagggcgagcggggcatgcctagcgaccaggagacggacggcatcctggac
cacatcatagacatgacctcgtacctgctgaacctcactagttacatggtatag
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