Salvelinus namaycush (lake trout): 120035331
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Entry
120035331 CDS
T07522
Name
(RefSeq) rho GTPase-activating protein 23-like
KO
K20315
Rho GTPase-activating protein 21/23
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120035331
Membrane trafficking [BR:
snh04131
]
Endosome - Golgi transport
Others
Others
120035331
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
120035331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
PDZ_6
PH_9
PDZ
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
120035331
NCBI-ProteinID:
XP_038838046
UniProt:
A0A8U0Q578
LinkDB
All DBs
Position
Sna3:complement(66911879..66943741)
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AA seq
1726 aa
AA seq
DB search
MGAGGEGVGVGWQGPRTLLLQKNTQGFGFTLRHFIVYPPESALHTSLKDEENGNGKGRSR
LEPMDTIFVKNVRERGPAHQAGLCTGDRLVKVNGESVLGKTYSQVIALIQNSESVLEVSI
MPKDEDVLQLAYSQDAYLRGNEPYTGGARNLPVPPPLCYAPRAKSQPPSGAPAPMGQNQL
DNWSRWAGSASPLSPLDNRSTVGSPASWQERRGGHSSPPHRTEEIQYGVTGQQPTGQTRG
RSYSSSSSSGGPLSSPLRVHYVNHNATATTASSQPRKGSQAWASPLQPSPSRSNHCQQAL
SEWYYSQAAEQRQGRSGSMHQRHRSYSQDRLCETGSGRHRRSPGGWPHSASQDTLMLLQQ
SGPGPHGDPSWTYGDWEGARDQSHPSSYGSRARSENLLVQYDRYGRSMEMLESPRFERPA
WLQQASQQAPRTEAYQRQGNHSGVAPAPSMGRQAQPHHKTQSQSHPHTQPQPQQPAPQSR
RLPTGQSLDDQPVGYRSYSPSFNRKTGRIMQQPSFRDPSYLGPHLSWAPTPKTSPPEGVV
PSVPSPLASTTPEPLDKAYRPTNHERGAVEGQVEVVAQTQEVKLRQKPPTGRRSAHAMRH
PHYTLPVDGTEPPVFPPDPHNAAPAPRPSGEGVPHRTNGNLAPLSVEDDAMASIPFIDEP
TSPSADLRARHVPASSVVSSGMSSAPAIVTSPASPTFTFPLTRLFSHDCSGIKSSRRSSY
LLAITTERSKSCDEGLNTFREEGRVFPRLPKRVKSFFIEGSLDSLGAAEEVRSKRHSTSE
LGSISYSDIWREGWLHYKQILTEKGKKVGSGMRPWRRVFSVLRSHSLFLYKDKREAVLRG
ATLGGDADEEQPISIRGCLVDIAYSETKRKHALRLTTQDFCEYLLQAEDREDMLDWIKVI
SENSKTDNEELGFSRQALISKKLNDYRKQSPTGNKPDSSPRVSRAKPSFLQAKMENAAGA
PRSPKPECKDESSAPKSPWGINIMKKSKKSGPKAFGVRLEDCQPAANNKFIPMIVEICCG
LVEEMGLEYTGIYRVPGNNAVVSSLQDQLNKGSDINPAEEKWQDLNVISSLLKSFFRKLP
EPLFTDDKYNDFIDANRMENAGDRLKTMKKLIRDLPDHYYHTLKFLVGHLKTVADHCEKN
KMEPRNLALVFGPTLVRTSEDNMTDMVTHMPDRYKIVETLIQHYLWFFSEDLDKDEKTPV
DTKDLVPAPNIDHLLSNIGRTALLGEASDSTNSDSAKSKGSWGSKRDLTAKDFLTLSIMS
AVTGRKRRNRHNGRLVGSSTDDDSEHEPIKVSHLGAEEGEEAGLVVAGTDTAPRAEGEEE
EDEEEEEEESVVERVREKVEEVKAPSMPCGSEKEKAGQTVMLLPEEEAVTAEVKGRVWRG
PEDARSIVSGYSTLSTLGRSLASEGRCDEADDERSELVSETDNESGFASRSLTQERPEKH
PPASFTPTLTPPTPTQPPTAAQRSFLYTHYKPHPVSPTTQQTTPTPSTHTQDPGERSEGG
ARSTTPSSSSSSTTHRLHTRPSFNSHKLIQCDTLARKKLKDRGKTKAHSLDLLDLPGPSG
EEGAGAPGAQRNRSRTNPSSGSSQESLRPPRPKEALPPSEAASFTPSGTGQGQGRGSLAD
QVRARLLGSADDLRIVGLRKPLSPETRRKRRAWRRHTVVVSPTESGDKRPALATNKFPMS
LATSNQGKPQGSPLDHQELDPRHPLPLGQNPPVTRRAPASRFHQYL
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgggaggagagggggtcggcgttggctggcagggtccccggacgctactactc
cagaagaacacacagggcttcggcttcacgctgcgacactttattgtctacccaccagag
tctgccctgcacaccagcctcaaggacgaggagaacgggaatggaaaggggagaagtagg
ttggagccaatggacaccatatttgtcaagaatgtgagagagcgaggtcccgctcaccag
gctggcttgtgtacaggggatcggctggtaaaggtgaatggagagagtgtcctggggaaa
acctactcccaggtgattgccctcatacagaacagtgagagtgtgttggaggtctctata
atgccaaaagatgaagacgttctgcagctggcatactcccaggatgcctacctgaggggc
aacgagccttacacagggggagcccggaaccttccggtacccccgcccctctgctacgct
ccccgcgccaagtcccagcctccctctggggccccggcccccatgggccagaaccagctg
gacaactggagccgctgggcaggctccgccagccctttgtcccccctggacaaccgctcc
accgtgggcagcccggctagctggcaggagaggcggggcggacacagtagccccccccac
aggacagaggagatccagtacggtgtgaccgggcagcagcctacgggacagaccaggggc
cgctcctactcctcatcttcctcctcaggagggcctctcagcagccctctgcgtgtccac
tacgtcaaccacaatgccaccgccaccaccgcctcctctcagccccggaagggcagccag
gcctgggccagccctctccagcccagccccagccgcagcaatcactgccaacaggccctg
tctgagtggtactacagccaagctgctgagcagcgccagggccgcagtggcagcatgcac
caacgccaccgcagctattctcaggacaggctgtgtgagacaggctccgggcgccaccga
cggagtccgggcggctggccccacagcgcctcccaggacaccctgatgctactgcaacag
tcaggccccggaccccacggagacccttcttggacctacggagactgggagggggcccgg
gaccagagccacccctcctcctacggcagcagagcccggtcggagaacctgctggtacag
tacgaccgctatggccgttcgatggagatgctggagtcgccccgtttcgagaggcccgcc
tggctgcagcaggcctcacagcaagcacccagaactgaggcctatcagaggcaggggaac
cattccggtgtcgcgccggccccctctatgggccgacaagcacagccgcaccacaaaacc
caatcacagtcccacccacatacccagccccagccccaacagccagccccccagagcaga
cgtctgcccaccggacagagcctggacgaccagccagtaggttaccgcagctacagcccc
tccttcaaccgcaagacaggccgcatcatgcagcaaccctccttcagggacccctcctac
cttggcccccatctcagctgggcccccacccccaaaaccagcccccctgaaggtgttgtc
ccctcagttccatcccctctggcctccaccacccctgagccccttgacaaggcctaccgc
cccaccaaccatgagagaggggcagtggaaggccaggtggaggttgtagctcagacccag
gaggtcaaactgagacagaaaccccccacggggcgaaggagcgcccacgccatgcgccac
ccccactacaccctgcctgtagatggcacggaacctcctgtgttcccccctgacccccac
aacgctgcccccgcccctcgcccctcaggagagggtgtcccgcaccgtaccaatggcaac
ctggcccccctgtctgtagaggatgacgcaatggcctccattccttttatagatgagccg
acgagccccagcgctgacctccgtgcccgccacgtgcccgcctcctccgtggtgtccagc
ggcatgagctcagctcccgccatcgtcaccagccccgcctcccccaccttcaccttccct
ctaaccaggctcttctcacacgactgcagcggtattaaatccagtcgccgttcctcctat
cttctagccatcaccacggagcgctccaagtcatgtgacgagggactcaacaccttcaga
gaggagggccgcgtcttcccgagactgccaaagagagtgaagagtttcttcattgagggg
tctctggacagtctgggggcagcggaggaggtgcgctccaaacgccactccacctcagag
ctgggcagtatcagctacagtgacatatggagagagggatggctgcactacaaacagatc
ctcacggagaagggcaagaaggtgggcagcggcatgcgtccgtggaggcgggtcttctcg
gtgttgcgctcccattcgctcttcctttacaaggacaagcgggaggcggtcctgcggggc
gccactctgggaggcgatgctgacgaggagcagccaatcagcatccggggctgcctggtg
gacatagcgtacagcgagaccaagcgtaagcacgcgctgcgtctgaccactcaggacttt
tgtgagtacctgctgcaggccgaggacagagaggacatgctggactggatcaaggtcatc
agcgagaacagcaagaccgacaatgaggagctgggattctcaaggcaggctctgatcagt
aagaagctcaatgactacaggaaacagagtccaacaggcaacaagccggactcctctccc
agggtgtcccgtgccaagccttccttcctgcaggccaagatggagaacgctgccggggcg
ccgcgctcacccaaacctgagtgcaaagatgagagcagcgcccctaagtcgccatggggg
atcaacatcatgaagaagtccaagaagtcagggcccaaggcttttggagtgcggctagag
gactgccagccagctgccaacaacaagttcatccctatgatcgtggagatctgctgtggg
ctggtggaggagatgggtctggagtacaccggcatctacagggtcccagggaacaacgca
gtggtgtccagccttcaggaccagctcaacaaggggtcggacatcaaccctgcagaggag
aaatggcaggacctgaacgtgatcagcagcttgctcaagtctttcttcaggaaacttccg
gagcctctcttcactgatgataagtacaatgacttcatcgacgctaaccggatggagaat
gccggggaccggctaaagaccatgaaaaaactgatccgtgacttaccagaccattactac
cacactctcaagttcctggttggccatctgaagacggtagctgaccactgtgagaaaaac
aagatggaacctcgtaacttggccttggtgttcgggcccacgctggtgcggacgtctgaa
gacaacatgacagacatggtgactcacatgcctgaccgctacaagatagtagagacgctc
atccaacattatctctggtttttcagtgaggacctggacaaggatgagaagactccagta
gacacgaaggacctggtgcctgcccccaatattgaccacttgctctccaacatcggcagg
accgctctgctaggggaggcgtcagactcaaccaacagtgactcagctaaatctaagggg
tcgtgggggtcaaagcgagacctcactgccaaggactttctgaccctgtccatcatgtcc
gccgtcaccggacgcaagcgcaggaatcgccacaatggccgccttgtgggcagcagcacg
gacgacgactcggagcacgagccaatcaaagtcagccacctgggggcggaggagggagaa
gaggcggggctggtggtggcaggaacagacaccgccccacgagcagagggagaggaggag
gaagatgaggaggaggaagaagaagagtctgtagtagagagagtgagagagaaggtagag
gaggtgaaagctcccagcatgccatgcggtagtgagaaagagaaagcagggcagacggtg
atgctgctccctgaggaagaggcggtgacagcggaggtgaaaggcagggtgtggcggggg
ccagaggacgctcgctctatcgtctccggttactccaccctctccacactggggcggagc
ctggcgtctgagggccggtgcgatgaagctgacgatgagcgcagcgaactggtgagtgag
acggacaatgagagcggattcgcctcgcgctcccttacccaggagagacctgagaaacac
ccccctgcatcctttacacccaccctcacaccccctacccccacacagccccccacagca
gcacaacgaagcttcctctacacacactacaaaccccaccctgtctcccccacgacccag
caaaccacccccaccccctccacacatactcaggaccctggggagaggagcgagggtggg
gcgcgatccaccaccccctcgtcctcctcctcctccaccacccacagactgcacacccga
ccctccttcaactcccacaagctgatccagtgtgacacgctagccaggaagaagctaaag
gacagagggaagaccaaggctcattctctggacctgctggacctccctgggccttcagga
gaggagggagctggggcaccaggggcccagaggaaccgatccaggaccaacccttcctca
gggagcagccaggagagcctacgtccaccccggcccaaagaagccctgccccccagcgag
gctgcctctttcacccccagcgggacagggcagggtcaggggcgagggtctctggctgac
caggtgcgtgcgcgcctgctgggctcggctgatgacctgcgtatcgtggggctgaggaag
ccactctccccggagacgaggaggaagagacgggcttggagaagacacactgtggtggtc
tcacctaccgagtcgggcgacaagaggcctgcgctagccaccaacaagttccccatgtcg
ctggccacttccaaccagggcaaaccacagggatcacccctcgaccaccaggagcttgac
ccaagacaccctcttcccctgggccagaatccccccgtcacacgccgagcacccgcctcc
aggttccatcagtacctgtaa
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