Salvelinus namaycush (lake trout): 120035891
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Entry
120035891 CDS
T07522
Name
(RefSeq) ras-related protein Rab-5C-like
KO
K07889
Ras-related protein Rab-5C
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04137
Mitophagy - animal
snh04144
Endocytosis
snh04145
Phagosome
snh04148
Efferocytosis
snh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120035891
04145 Phagosome
120035891
04137 Mitophagy - animal
120035891
04148 Efferocytosis
120035891
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120035891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120035891
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120035891
04031 GTP-binding proteins [BR:
snh04031
]
120035891
Membrane trafficking [BR:
snh04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
120035891
Endosome - Lysosome transport
120035891
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120035891
Exosomal proteins of other body fluids (saliva and urine)
120035891
Exosomal proteins of colorectal cancer cells
120035891
Exosomal proteins of bladder cancer cells
120035891
GTP-binding proteins [BR:
snh04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
120035891
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
AAA_16
Motif
Other DBs
NCBI-GeneID:
120035891
NCBI-ProteinID:
XP_038838285
UniProt:
A0A8U0Q7Y4
LinkDB
All DBs
Position
3:complement(68202451..68220399)
Genome browser
AA seq
219 aa
AA seq
DB search
MAGRGGPARTNGAAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALSGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPAGGAGGRAGGRAGVDLQEAAPQAGGSKCCGGN
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtcgaggaggaccagcacggaccaacggcgcggcggccagcaacaagatctgc
cagttcaagctggtgctgctgggagagtcagcggtgggcaagtccagcttggtgctgcgc
ttcgtcaagggccagttccacgagtaccaggagagcaccatcggagctgccttcctcaca
cagaccgtctgcttggatgacacaacagttaagtttgagatctgggacactgcagggcag
gaacggtatcacagcctggcccctatgtactacagaggagcgcaggctgccatcgtggtc
tatgacatcaccaacacagatacattcacacgtgcaaagaactgggtgaaggagctccaa
cgacaagccagccctaacattgttattgcactgtcaggaaacaaagctgacctggccaac
aaaagagctgtggacttccaggaagcacaagcgtacgcagatgacaacagtttgctcttc
atggagacttcagccaagacggccatgaacgtcaatgagatctttatggccatagccaag
aagcttcctaagaacgagccagcgggtggagccggtggccgggccggtggtcgggcagga
gtggacctgcaggaagccgccccacaggctggtggtagcaagtgctgtggtgggaactaa
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integrated database retrieval system