Salvelinus namaycush (lake trout): 120035919
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Entry
120035919 CDS
T07522
Symbol
capn3a
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120035919 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120035919 (capn3a)
Enzymes [BR:
snh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
120035919 (capn3a)
Peptidases and inhibitors [BR:
snh01002
]
Cysteine peptidases
Family C2: calpain family
120035919 (capn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_7
EF-hand_1
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
120035919
NCBI-ProteinID:
XP_038838323
UniProt:
A0A8U0U3G9
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MPFTPSGFFCDRLIRERERRDGEGSLSKPLRFRGQDFATLKQECLTKKCLFEDDTFPASV
ESLGYKELGHKSNKVKNIVWKRPKEICENPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNEKLLYRVVPQEQSFSEGYGGIFHFQFWRYGDWVDVVIDDRIPTFNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYEMKEAPKELYKIMKKALERG
SLMGCSIDSLVPARFETRTATGLVKGHAYSVTAVEECKQSQHKASKVRLVRLRNPWGQVE
WNGPWSDNSKEWVSLSKGEKDKLQHQSAEDGEFWMSFEDFKKNYTKIEICNLTPDALEDD
KLHKWTVSVNEGRWVRGCSAGGCRNYPNTFWTNPQFRLCLLEEDDDSEDNEVACSFVIAL
MQKNRRKERKMGANLFTIGFAIYEVPKEMHGNKQPMQKDFFLFNSSKARCKSYINLREVT
QRFRLSPGEYVIIPSTYEPHQEGEFILRVFSEKRNTSEEIENKIEADHPVPAPANAGEER
EEDQQFRSIFQQIAGDVSTGRPVSAWGNEMEITANELKNVLNRVVSIHKDLNTEGFSLES
CRSMISLMDMDGTGRLNLQEFRHLWNKIKQWQGIFRHYSSDQAGIINSYEMRNAVNDAGF
RLNNQLYDIITMRYANEDMNIDFNSFISCLVRLEAMFRAFQAFDQDGTIRLSVLEWLQLT
MYA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgccctttacaccgtccggcttcttctgtgaccggttgatccgggagagagagagaaga
gacggagaaggatccctcagcaagcccctgcgcttcagaggacaggactttgccacactg
aaacaagagtgcctcaccaagaagtgcctgtttgaggatgacacctttccagcctccgtg
gaatctctgggatacaaggagctgggacacaagtccaacaaggtcaagaacattgtctgg
aagagacccaaggagatctgtgagaaccctcagttcattgtgggcggagccagcaggaca
gacatttgccagggagaccttggtgactgctggctgctagctgctatcgcctgtctgact
ctgaacgaaaagcttctctaccgggtcgttcctcaggaacagagcttctccgagggatat
ggaggaatcttccacttccagttctggcgctatggcgactgggttgacgtcgtcattgac
gaccgcatccccaccttcaacaaccagctggtgttcaccaagtctgctgagaggaacgag
ttctggagcgccctgctggagaaggcctacgccaagcttcacggttcctatgaggccctg
aagggcggtaacaccacggaggccatggaagacttcaccgggggcgtgacagaattctat
gagatgaaggaggcgcccaaggagctgtacaagatcatgaagaaggccctggagagaggc
tccctgatgggctgctctatcgactccctggttcccgctcgctttgagacccgtactgcg
actggcctcgtgaagggccacgcctactctgtgactgccgttgaagagtgtaagcagtcc
cagcacaaggcatctaaggtgcgtctggtgcgcctcaggaacccctggggacaggtggag
tggaacgggccctggagtgacaactctaaggagtgggtgtctctgtctaagggagagaag
gacaagctccagcatcagagtgctgaggacggtgagttctggatgtcctttgaggacttc
aagaagaactacaccaagatagagatttgcaacctgacccctgatgccctggaggacgat
aagctccacaagtggacggtgtctgtgaacgagggtcgttgggtcagaggctgctccgcc
gggggctgcaggaactacccaaatacattctggaccaaccctcagttccgtttgtgtctc
ctggaggaggatgatgactcagaggacaacgaggtggcgtgttcctttgtgatcgctctg
atgcagaagaacagacggaaagagaggaagatgggagccaatctcttcaccatcggtttt
gccatctacgaggtgccgaaggagatgcacggcaacaagcagcccatgcagaaggacttc
ttcctgttcaactcatccaaggctcgctgcaagtcctacatcaacctgagggaggtgacc
cagcgcttccgtctgagccccggggagtacgtgatcatcccgtctacctatgagcctcac
caggagggagagttcatcctcagagtcttctccgaaaagaggaacacctcagaggagata
gagaacaagatcgaggctgaccatccagtgccggccccagccaatgcgggggaggagagg
gaggaggaccagcagttccggagcatctttcagcagatagccggggatgtgagtacgggg
aggccagtgagcgcttgggggaatgaaatggaaattaccgccaacgagctgaagaatgta
ctcaacagggttgtctccatacataaggacctgaacacagaggggtttagcctggagagc
tgcaggagcatgatctctctcatggacatggacgggactggcagactcaacctgcaggag
ttcagacatctctggaacaagatcaaacagtggcagggaatctttcgacactatagctcg
gaccaggctggtatcatcaacagctacgagatgagaaatgccgtcaacgatgcaggcttc
cgtctcaacaatcagctctatgacatcatcaccatgcgttacgccaacgaggacatgaac
atcgactttaacagtttcatcagctgtctggtccggctggaagccatgttcagggcgttc
caagcctttgatcaggatggtacgatcagacttagtgtcttggagtggctccagctgacc
atgtatgcctag
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integrated database retrieval system
