Salvelinus namaycush (lake trout): 120036487
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Entry
120036487 CDS
T07522
Name
(RefSeq) protocadherin-17-like
KO
K16499
protocadherin delta 2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120036487
Cell adhesion molecules [BR:
snh04515
]
Cadherins
Protocadherins
120036487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
PepSY
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
120036487
NCBI-ProteinID:
XP_038838856
UniProt:
A0A8U0Q6R2
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MYLSILFFLLLWAQALALKNLNYSVNEEQGPGTVIGNIAKDAKLGLGQGGQGKKSNFRVL
ENSAPHLIDVDPESGLLYTKQRIDRETLCRRNPKCQLSMEVFANDKEICMIKVDIVDIND
NSPTFPSDQIDIDISENAAPGTRFPLTSAHDPDAGENGLKTYQITRDDYNLFSLDVKSRG
DGTKFPELVIQRPLDREERNHHTLILTATDGGEYPRSGTMQINVKVIDSNDNSPVFEQPS
YVVDIPENSPPGKVLIDLNATDPDEGSNGQVVYSFSGYAPDRIRELFSIDSRTGVIKIQG
EIDYEENSIIEIDVQAKDLGPNPIPGHCKVTVNVIDRNDNWPSIGFVSVRQGAISEAAPP
GTVIALVRVTDKDSGRNGKLQCRVLGNVPFKLEENYDNFYTVVTDRPLDREQQDEYNVTI
VAKDNGTPPLNSTKSFTVKILDENDNVPRFTKAVYLLQVPENNIPGEYLGSVLALDPDLG
QNGTVFYSILNSNVSGGDVNTFVNVNAANGAIYAVRSFNYEQIKFFDFKVLAKDAGSPHL
ESNTTVRVSVLDVNDNIPVIVLPLLLNDTAEIHVPRNVGVGYIVTTVRAVDNDYGESGRL
TYEISDGNEERLFEMDPVTGEVRTSHPFWEDVSPMVELIIRVMDHGKPTLTTAARLIVKA
YSGPLPGGEPHINEEHHNWDTSLPLIVTLSIISTMLLAAMVTIAVKCKRENKEIRTYNCR
IAEYSHPQLGKGKKKKINKNDIMLVQSEVEERDAMNVMNVVSSPSLATSPMYFDYQTRLP
LSSPRSEVMYLKPTASNLLVPQGQGHGVGCHTSFTGPVTNTTDTPSNRMSIIQVGTRYH
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgtatctttctattttatttttccttctcctttgggctcaagccctggctttgaaaaac
ttgaattattccgttaacgaagaacaaggaccggggacggttataggcaacatcgccaaa
gatgctaaactcggtctcgggcaagggggacaagggaaaaagtccaacttcagggttttg
gagaattcagcaccacatctcatcgatgtggaccctgagagcgggctgctctacaccaag
caacgcatcgacagggaaacactgtgtcggcggaaccccaaatgtcaactctccatggag
gtatttgctaacgacaaagagatctgcatgattaaagtagatatagtcgacatcaacgac
aactcgcccacgttcccttccgatcagattgatattgacatttctgagaacgctgccccg
ggcacccgtttcccgcttactagcgctcatgacccggacgctggagagaacgggctaaaa
acctatcagatcacacgagacgactacaatctgttttctctggatgtaaaatcccgcggg
gacggaactaaatttcccgagttagttatccaacggccgttagaccgggaggaacgcaac
catcacacccttatcctaaccgctacggacggcggggagtatcccagatcaggaaccatg
cagattaatgtgaaagttattgactctaacgacaacagccctgtgtttgaacagccctcg
tatgttgtagatatcccagaaaactctccacctgggaaagtattgatcgatttaaacgcc
acagacccagacgagggttccaatgggcaggtcgtgtattcattcagcggttacgccccc
gacagaatcagagaactcttctctatagattctagaacgggagtcataaaaatccaagga
gagattgactatgaggagaactctattatagaaatagatgttcaggcgaaggatttaggc
cctaaccccatcccaggccactgtaaagtaactgtgaatgtgattgacaggaatgacaac
tggccctccattgggtttgtgtctgtgaggcagggggccattagtgaggccgccccgcca
ggcactgtcatcgccctggtcagagtcacggataaagactctggcaggaacgggaagctc
cagtgtagagtcttggggaacgttccgtttaaactagaggagaactacgacaacttctac
accgtggtgacggacaggcctctggacagagaacagcaggacgagtacaacgtcaccatc
gtcgccaaggacaacggcacgccgccccttaactccaccaagtcgttcacggtgaagatt
ctagacgaaaacgataatgttccgcgcttcaccaaagccgtgtatctgctccaggtgccg
gagaacaacatccccggggagtatctgggttccgtcctcgctctagacccggacctgggc
cagaacggaaccgtgttctactccatcctcaactccaacgtgagcggaggagacgtcaac
accttcgtgaacgtgaacgcggccaacggggcgatctacgccgtgaggtcattcaactac
gaacaaatcaaattctttgattttaaggttttagcaaaggatgctgggtctccccacctg
gagagcaacaccacggtcagagtcagcgtcttagacgttaacgacaatatccccgtaatc
gttctcccgctgctcctgaacgacacggcagagatccacgtgccacggaacgtcggcgta
ggttacatcgtcaccacggtgagggcggtcgacaacgattacggcgagagcgggcgcttg
acctacgagatctctgacggtaacgaggagcgtctgttcgagatggacccggtgacgggc
gaggtgcggacctctcaccccttctgggaggacgtcagccccatggtggagctgatcatc
agggtgatggaccacgggaagcccaccctcaccaccgccgcacgcctcatcgtcaaggcc
tacagcgggccgctgccgggcggggagccccacatcaatgaagagcatcacaactgggac
acctcgctccctctcatcgtcaccttatccatcatctctaccatgctgctggctgccatg
gtaaccatcgccgtgaagtgcaaacgggagaacaaggagatcaggacgtacaactgccgc
atcgcggagtactctcacccacagctgggcaaaggcaagaagaagaagatcaacaagaat
gacatcatgctagttcagagcgaggtggaggaacgggacgccatgaacgtcatgaacgtg
gtgagctcaccatcgctcgccacctcccccatgtatttcgattaccagacgcggctgccg
ctgagctcgcccaggtcggaggtcatgtacctcaagcccacggccagcaacctgttggtg
ccccagggacagggacacggcgtcggctgtcacacgtccttcactggcccggtgactaac
accacagatacccccagtaacaggatgtccattatacaggtaggaacaagataccattaa
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