Salvelinus namaycush (lake trout): 120037182
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Entry
120037182 CDS
T07522
Name
(RefSeq) periplakin-like isoform X1
KO
K10386
periplakin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120037182
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120037182
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
120037182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin_1st_PEPL
SH3_10
Plectin
SR_plectin_7
ERM_helical
Spectrin
Motif
Other DBs
NCBI-GeneID:
120037182
NCBI-ProteinID:
XP_038839283
UniProt:
A0A8U0U4E3
LinkDB
All DBs
Position
Unknown
AA seq
1756 aa
AA seq
DB search
MFKKKPSKNSVTITQTKKAPSSELSALIEKLQKNADKVEKLILETEQNLNKDVSKINEGK
QPLYQDDTNKRILSSLELLEGLDEDAVDAKRLQHPQAEMIEQDMKQLRVRLRKLREDHDR
IYHLTRSEGMPSVNWGRIIEEKQGNLSNKGFGQDLPTIENEVEEHNIFHSEVEALAPHIS
ASDDKDSASALQLKYNKLLASSSARQRHLLSLRDYMQRCTNELYWMDQQAGERINYDWSD
TNLDYPARHRQYENFISKCLESKEATVTKLNDDGDKLIASNHPGKNVIEAHMEAVHADWK
EYLNLLICEENHLKHMDEYHKFHKEARDTQDLLKRMDKEVDQKYKPEFKDMYQMESLIRD
LDDQAKAMDHFDERVKALEKRSLQVLPLQFRRNTPQKLLPVEALCEFDTDEGQILRGERY
TLLSNKGPKWEVKDAAGRKLTAPGACFMVPPTDPESVAVSNGLASQQKGIKMKVSGSKTT
LVKRLEELKKDGSAGSDKEEQQCRQLMAGLDKVTSDLDKQEKAIYSRVRPPLEQTRPLQD
SADRLQDVKDIAVVVRKIEPEKSSKVREAEKFLTSNPKCASAPQLNGKVNEANNKYDKIN
LLLKCSEDKLQNSNRLENSLQNGKSLLSSYENKLVREEVAPADISSLEKTQRQLADISSE
LKTKRSAVTETEANLRAAKGSCDTMATKVQEHCPDIERQEGEVRKLNKRYDNLNRQIDTR
TQSLQRAKTSYSSYRSDYDNLNNWLSRVPNYEPTEKDNLSQVETKLENQKNLLSDIKKKE
SELNNVSKNAQLYQQAVKDYENDTEKFKSILDLEDGLVPQTYKRSRLESPALRVKEEESA
IEAKFTEVNAVNKQRMANLQFAQGLMNQQSDVIVSNNVQQVKSAAPGEEAWRIESQLKDE
IQRREQLEKDLEKIQTDIYMLEGQKPEDTVVKKEIIKKVPDPTLVDEVHNVRQKLSDETR
VTRAMDNELEALRLKLRGIETEIKEGAQQYTVKEVLRIERDRGQEEEVRRLREELEELRR
KKTIKDNEVIQITKQVTLLAQQKSKEQEVITEEEVIKVQNDPQLENEYRILLDRKQKEQE
ARKQLEDELRFLQDKLRRLEKEKSMAEEKISIKEVLKVEKDIAFEREVENLRMQHEDEKS
KHRSSQRERADLQRKISSLEEEKSRVIVQEKVREIVRPDPKAEAEVANLRMELVEHQRRY
RDADQQLKSHQDELKMLRNRGPQIEIKEIIKEVIKYKTDPQTERELEKLRNEIVDKTHQT
EKSEMEIRQLRDEIQRWKDTKPQVQIKEVVNEVLEYKENPKTKEEIEILKRKLADEQKKR
LDLERERSANEEKIRLRKIDLSQVREKVVQQEVVKIEEDPLLRSECSTFTQNINNEQRQR
ETLKEELFQLQRQKANLDAQLEELERERRARRDAELEIQRLRVRLNEMEVRDKENRERVT
VKQMVVLQQDPQQEKEHSILKLQVEEERHKRTLLEKELNVLLQQQVTLERTVVKEKVVRT
ETIQVEKDPEAELEIEKMTRTLEQEKRRRLELDQELGSLKSRLSDMEFTNTKSSKELDYI
RDESSRLQQENQRLQNDIRRLQSEIQITSTETRSISNSAPMESGKNLELRLDSLQRELAD
LRAITSQKDEEIEKLQRSLSAIQIKREQRESHLRRSIVVIDPDSGKEMRPEEAYKLGLID
WKMFVNLQSQECDWEEISVKGPKGESSVLHDRKSGKKFSIEDALRAGNITNRQLQQYHDK
EITIQEFGVMVSGKTK
NT seq
5271 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagaaaaaaccctcgaagaatagcgtgaccatcacgcaaacgaagaaggcaccc
tcctctgagctgtctgcactgattgagaagctgcagaagaatgctgacaaggtggagaag
ctcatccttgagacggagcagaacctcaacaaggatgtgagtaagatcaacgagggcaag
cagcctctgtaccaggacgacaccaacaagcgcatcctgagctctctggagctgctggaa
ggcctggatgaggacgccgtcgacgcaaaacgcctgcagcacccccaggctgagatgatt
gaacaggatatgaagcagctgagagtgagactaaggaagctgagagaggaccacgaccgc
atctaccacctgacccgctctgagggcatgccgagcgtcaactggggcaggatcatagag
gagaaacagggcaacctgagcaacaagggttttggtcaggacctgccgaccatcgagaac
gaggtggaggaacacaacatctttcacagtgaggtggaggccctggcccctcacatctcc
gccagcgacgacaaggactctgccagtgccctccagctgaagtacaacaagctcctggcc
agttccagtgctcgacagcgccacctgttgagcctgcgtgactacatgcagcgctgcact
aatgagctgtactggatggaccagcaggcaggggagaggatcaactatgactggagcgat
actaacctggactaccctgcacgtcacagacagtatgagaacttcatcagtaagtgtctg
gagtccaaggaggccactgtcaccaagctgaatgatgatggagataaactcatcgcttcc
aaccatcctggcaagaatgttattgaggctcatatggaggctgtgcatgcagactggaag
gagtacctgaacctgctcatctgtgaggagaaccacctgaaacacatggatgagtaccac
aagttccacaaagaggcccgggacacccaggaccttctgaagagaatggacaaagaggtg
gaccagaagtacaaaccagagttcaaggacatgtaccagatggagagcctcatcagagac
ctggatgaccaggcgaaggccatggaccactttgatgagcgtgtgaaggctctggagaag
cgcagtctacaggttctccccctccagttccgcaggaacacccctcagaagctgctcccc
gtcgaggcgctgtgtgagttcgacactgacgagggtcagatcctgcgtggagagaggtac
accctcctgagtaacaaggggcccaagtgggaggtgaaggacgcggccgggcgtaaactg
acggctccaggggcctgcttcatggtcccccccacagacccagagtctgtcgccgtctcc
aacggtctggccagccagcagaagggtattaagatgaaggtgtctggcagtaagaccacc
ctggtcaaacgcctggaggaactgaagaaagacggctccgctggctctgacaaggaggag
cagcagtgtcgccagctgatggccggtctggacaaggtgaccagtgatctggacaaacag
gagaaggccatctactctcgagtccgccccccgctggagcagaccaggccactgcaggac
agcgctgaccgtctgcaggacgtcaaggacattgcggtcgtggttcgtaagatcgagccg
gagaagtcgtccaaggtgagggaggctgagaagttcctgacctctaaccctaaatgtgcc
agcgcccctcagctgaacggcaaggtgaacgaggccaacaacaaatacgacaagatcaac
ctgctgctcaagtgctcagaggacaagcttcagaattccaaccgcctggagaactccctt
caaaacgggaaatctttattgtccagctacgagaacaagctggtcagggaggaagtcgcc
cccgcagacatctcgtctctggagaagacgcagcgtcaactggctgatatttcatcagag
ctgaagaccaagaggtccgcggtgacggagacggaggctaacctgcgtgcggccaaaggc
agctgtgacaccatggcaaccaaggtgcaggagcactgccccgacatcgagaggcaggag
ggcgaggtccggaaactgaacaaacgctacgacaacctcaacaggcagatcgacaccaga
actcagagcctgcagagggctaagacgtcctacagcagctaccgcagtgattacgacaac
ctgaacaactggctgtcccgcgtgccaaactatgagccaactgagaaagacaacctcagt
caggtggaaaccaagctggaaaaccagaagaacctgctctccgacattaaaaagaaggag
tctgagttgaacaacgtatcgaaaaatgctcaactttaccagcaagccgtcaaggactat
gagaatgatactgagaagttcaagtctattctggatcttgaagacgggctggtccctcag
acctacaagagaagcagactggagtcccctgcactcagggtcaaggaagaggaatctgcc
attgaagctaaattcaccgaagtgaatgcagttaacaagcaaaggatggcgaatctgcag
tttgcccaaggccttatgaatcagcaatcagacgtgatcgtcagcaacaatgtccagcaa
gtcaaatctgccgctcccggagaagaagcctggaggatcgagagtcaactgaaagacgag
atccagaggagggagcagctggagaaggatctagagaaaatccagacagacatctacatg
ttggagggtcagaagccggaggacaccgtcgtcaagaaggagatcatcaagaaggttccg
gatcctactctggtcgacgaggtccacaatgtccgtcagaaactgtcagacgaaacccgg
gtcacccgggccatggacaacgagctggaggcgctgaggttgaagctgcgcggcatcgaa
acagagatcaaagaaggagcacagcagtacactgtgaaggaggtgcttcgtatcgagagg
gaccgcggccaggaggaggaggtgaggaggctcagggaggagctggaagagctgaggagg
aagaagaccatcaaggacaatgaggtgatccagatcaccaagcaggtgacgctcctggca
cagcagaagtccaaggagcaggaggtgatcacagaggaggaggtgattaaagtgcagaat
gacccacaactggagaacgagtaccgcatcctcttggacaggaagcagaaggagcaggag
gccaggaagcaactggaggacgagctgcgcttcctccaggacaagctccgcaggctggag
aaggagaagtccatggccgaggagaagatctccatcaaggaggtgctgaaggtggagaag
gatatcgcctttgagagggaggtagagaatctcaggatgcaacacgaggatgagaagtcc
aagcaccggtcttcccaaagggagcgcgccgacctccagaggaagatctccagcctagag
gaggaaaagtcaagggtcatagttcaggagaaggtgagggagatcgtcaggcctgacccc
aaggctgaggctgaagtggccaacctacgcatggaactggtggagcaccagaggagatac
agagacgccgaccagcagctgaagtcccaccaggacgagctgaagatgctgagaaacaga
ggtccgcagatcgagatcaaggagatcatcaaggaagtcatcaagtacaagacggacccg
cagaccgagagggagctggagaaactccgcaacgagattgtggacaagacgcaccagacg
gagaagtcagagatggagatcaggcagctgagggacgagattcagcggtggaaggacacc
aagccccaggtgcaaattaaagaggtggttaacgaggtgctggagtacaaagaaaacccc
aagaccaaggaggagattgagatcctgaagaggaagctggcggacgagcagaagaaacgc
ctggacctggagagggagcgatcagctaatgaggagaagatccggctaaggaagatcgac
ctgtcccaggtcagggagaaggtggtccagcaggaggtggttaagattgaggaggaccca
ttactgaggtcagagtgcagcaccttcacacagaacatcaacaatgaacagaggcagagg
gagaccctgaaagaggagctcttccaacttcagaggcagaaggccaacctggacgcacag
ctggaggagctggagcgagaacgccgagctaggcgcgatgcagagctggagatccagagg
ctgagggtcaggctgaacgagatggaggtcagggacaaggagaacagggagagggtcaca
gtgaaacagatggtggttctccagcaggacccccagcaagagaaagagcactctatcctc
aagctgcaggtggaggaggagagacacaagcgcaccctactggagaaggagctgaatgtc
ctgctccagcagcaggtcaccctggagaggacagtggtgaaggagaaggtggtgcgcacc
gagaccatccaggtagagaaggacccagaggctgagctggagatcgagaagatgacgagg
acgctggaacaggagaagaggaggaggctggagctggaccaggagctgggcagcctcaag
tcccgcctgtccgacatggagttcaccaacaccaagtcgtccaaggagctggactacatc
cgcgacgagagcagccgcctccagcaggagaaccagaggctacagaatgacatccgcagg
ctgcagtccgagatccagatcacctccacggagacccggagcatctccaactcggccccc
atggagagcgggaagaacctagaactgaggctggactcactgcagagggagctggccgac
ctaagggccatcaccagccagaaggatgaggagatcgagaagctacagaggagcctctcg
gctatccagatcaagagggagcagagggagagccacctgaggagatccattgtggtcatc
gaccccgactcgggtaaggagatgaggccggaggaggcctacaagctggggctgatcgac
tggaagatgtttgtgaacctccagagccaggagtgcgactgggaggagatcagtgtcaag
ggccccaagggggagtcctctgttctccacgacaggaagtctgggaagaagttttccatt
gaagacgccctgagggctgggaacatcaccaaccgccagctgcagcagtaccatgacaag
gagatcaccatccaggagttcggcgtcatggtgtcgggaaagaccaagtga
DBGET
integrated database retrieval system