Salvelinus namaycush (lake trout): 120037228
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Entry
120037228 CDS
T07522
Name
(RefSeq) neurogenic locus notch homolog protein 2-like
KO
K20995
Notch 3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04330
Notch signaling pathway
snh04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120037228
04371 Apelin signaling pathway
120037228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
Notch
NODP
NOD
EGF_3
Ank_3
Ank_4
Ank_5
EGF_DL_JAG
EGF_Teneurin
Plasmod_Pvs28
cEGF
PepSY_TM
DUF7472
Motif
Other DBs
NCBI-GeneID:
120037228
NCBI-ProteinID:
XP_038839335
UniProt:
A0A8U0Q9W8
LinkDB
All DBs
Position
Sna3:72438055..72478123
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AA seq
2476 aa
AA seq
DB search
MGGNYKAWIFLPILFLVHNCEGFRCVDTYRPCDNGGTCIDSPSRCICRPGYIGPLCQSLD
PCHRSPCLNGAACKSQVANGMPQFTCVCQRGFRGQDCSLIDACATSPCANGARCASWNNH
YNCSCPPGFQGKNCRNDIDECRKSGVCLNAGLCMNTHGSFRCQCPPGYSGRTCEVSSLPC
APSQCINGGTCRPTGDHTYDCACLPGFEGHNCETNVDDCPGHRCMNGGLCVDGVNTYNCQ
CPPEWTGQYCAEDVNECLMQPNACHNGGTCFNTIGGHTCVCVNGWTGDDCSENIDDCATA
VCFNGATCHDRVASFFCECPVGKTGLLCHLDDACVSNPCNEGAVCDTNPLNGRAICTCPA
GFVGGACNQDMDECSIGANPCEHFGKCVNTEGSFQCQCGRGYAGPRCEIDINECLSMPCQ
NDATCLDRIGEFTCICMPGYMGTYCEVDVDECESNPCVNDGICRDMVNGFTCTCQPGFTG
TMCQIDIDECASTPCQNGAKCYDRPNGYECRCAEGYEGTLCESNTNNCQPDPCHHGTCVD
GIASYTCNCEAGYTGYRCENQLNECHSNPCQNGGKCVDLVNKYICQCQHGTSGTNCEINF
DDCASKPCDYGICKDGINRYDCVCKPGFTGPLCNVEMDECSSGPCRNGGTCVDEENGFHC
QCPEGFQPPYCFSQVDECGSNPCVHGACRDDINGYRCDCEPGWVGKNCDLDRNDCLPSPC
QNAGTCIDQLNGFTCKCRQGFRGNLCQVNINECSSSPCLNQGTCVDGVASFTCLCELPYS
GPTCADVLTPCSPNPCANHALCTNTPDYLGYQCNCQQGWQGQLCNIDVNECIANPCKNRG
TCTNTLGGFVCSCRGGFTGPNCETDINDCAPNPCLSGGSCTDGVNSFRCSCLPGFTGPRC
AVEVNECQSAPCKNGGTCTDYVNSYTCTCRPGFTGINCETNIPDCTESSCFNGGTCTDKI
NGYSCTCRSGFTGSHCQYEVNECDSQPCLNGGVCQDALESFRCSCPKGYTGNRCQMPVDW
CRRSSPCQNGGRCRQKDASFSCECLGGWSGRYCDIPGVSCEVAALKRGLQTDELCHHGGH
CVNTGNTHYCKCPTDYTDSYCESQVDHCEDKHCRNGATCRGYVGGYQCDCMPGYTGENCE
MEVNECQSHPCQNGGTCIDLVGHYICSCPPGTLGVLCEINEDDCAPPLRLRGTPPKCLNN
GTCVDRVGGYRCNCPPGFTGERCEGDINECHSNPCSPANSLDCIQLPNDYQCVCKPGFTG
RRCQSRFSVCESQPCQNGGACSVSSSSALGYACTCQLGYAGNNCERRMTCRELSCYNGGS
CALTTRGARCTCLTGYAGPQCQHRSNEGCSSQPCRNGGLCTEETSFPFFLCQCAQGWTGK
RCEQGSTRLVETLPPPACTLADCHGKANDGVCDKECNTFPCRWDGGDCSLAVNPWARCTD
PRCWRVFNNSQCDESCNNADCLYDNFDCKNKEKICNPIYEAYCIDHYADGRCDQGCNSEE
CGWDGLDCAGKVPENLADGVLVLVVLLPPDELVNTAPAFLQKLSAILRTTLRFHLDHNGE
PMIHPYTGKEARIKRELQPHQEVIGSIVYLEIDNRLCSQRSDDCFPSADSAADYLGALSA
VEMLHFPYPIKEVRGEKMQGPVDMPEWGKLMLVGMAALFLLVILVVGVLIGRRKREHSTL
WFPEGFFPKKEPSSNKNRREPLGQDALGMKYMPKTVEESLLGDHSDSWIDTDCPEAKRLK
VEEPSILSDSEDTVDCRQWTQHHLAAADIRMPPSMALTPPQGEFDQDCMDVNVRGPDGFT
PLMLASFCGGGLEPELPEEEESEECSANIISDLIYQGATLAAQTDRTGETALHLAARYAR
ADAAKRLLDAGADANAQDNTGRTPLHAAVAADAQGVFQILIRTRATDLDSRMYDGSTALI
LAARLAVEGMVEELITCHADINSVDELGKSALHWAAAVNNVEATMALLKHGANKDMQDLK
EETPLFLAAREGSCEAVKVLLAHFANREITDHMDRLPRDIAQERMHHDIVQLLDEYNTVR
SPQGHGGAPHHLAGGHTLSPLMCPPSAFMPGLKNTPQGKKSRRPGAKGSGLGGQHAQNLK
DSAKARNKKLTLDMQSALLESSVTLSPVDSLDSPRGGANNAGYITNPCSPVAMPSSGLFH
SMSVPSTPMVHSSMMDGSGPFAVSLAQLNDLGDGGMSMQGRVSMASQVNQGPHGYVLNAG
QLGLNMGLVSPVSVPFDWHSRMPSSSQCGGQVVNLVHSSQAGMHPQSPMQQQQNSLMMQQ
HQQHQQHQQNLYRSAQQAMLQPTPVIASTPISLSPVKLPSIAEQQLHNHSMASQQSLRMG
TSSPPTPQTTQPPPAFFQQQQPPQPQPAPQPTSPQASQAPPPQASGSTAGLEDYPTPPSQ
HSYTSTMDATPKHYLRLSSEHPYLTPSPESPEPWSSPSPHCVSDWSDSTPSPAVAGPAQT
QIPHVQESNGKMQVFA
NT seq
7431 nt
NT seq
+upstream
nt +downstream
nt
atgggggggaattataaagcttggatatttttaccaattttattcttggtccataattgc
gaaggattccgctgcgtggatacatacagaccttgtgacaatggaggaacgtgcatagac
tcaccctcgcgatgcatatgtcggccggggtacatcgggcctctgtgccaaagcctggac
ccctgtcaccggtcgccatgcctcaacggagccgcctgcaagagccaggtggccaacgga
atgccacaattcacctgtgtgtgccagagagggttcagaggtcaagactgctccctcata
gacgcctgtgccaccagcccctgtgccaatggcgcccgctgtgccagttggaataaccac
tataattgttcctgcccgcccgggttccaggggaagaactgccgcaacgatatcgacgag
tgccgcaagtctggcgtctgtctcaatgcaggcctctgcatgaacacccatggttccttc
cgctgccagtgcccacctgggtacagcgggcgcacctgcgaggtgtcctccctgccctgc
gccccctcccagtgcatcaacgggggcacctgccgcccgaccggagatcacacctacgac
tgtgcctgcctgccagggttcgagggacacaactgtgagacgaacgtggacgactgccca
gggcataggtgtatgaatggaggcctgtgtgtggatggagtcaacacctataattgccag
tgcccacctgagtggacaggtcagtactgtgcagaggatgtcaatgagtgccttatgcag
cccaacgcctgccataacggaggcacctgcttcaacaccatcggggggcacacctgcgtg
tgcgtcaacggctggacgggagacgactgcagcgagaacatcgacgactgtgccaccgcc
gtgtgcttcaacggcgccacctgccacgaccgcgtggcgtccttcttctgcgaatgcccc
gtggggaaaaccggtctgctctgtcacctggacgacgcgtgcgtcagcaacccgtgtaac
gagggcgccgtgtgtgacaccaaccccctgaacgggcgcgccatctgcacctgtcccgcc
ggcttcgtgggcggagcctgcaaccaggacatggacgagtgttccattggtgccaacccc
tgtgaacactttgggaagtgtgtgaacacagaggggtccttccagtgccagtgtggccga
ggctacgccggcccccgctgtgagatagacatcaacgagtgtctgtccatgccctgccag
aacgatgccacctgtctggaccgcatcggagagttcacctgcatctgcatgccaggctac
atggggacctactgtgaggtggatgtggatgagtgtgagagcaacccttgtgtgaacgac
ggtatctgccgggacatggtcaacggcttcacatgcacctgtcagccagggtttactggc
accatgtgtcagatcgacattgatgagtgcgctagcacgccctgccagaacggagccaag
tgttacgaccggcccaacggatacgagtgccgctgtgctgaagggtacgagggcacactg
tgcgagagcaacaccaacaactgccagcccgacccgtgccaccacggcacctgcgtggac
ggcatcgccagctacacgtgtaactgtgaggcgggctacacgggctaccgctgcgagaac
cagctgaacgagtgccacagtaacccctgccagaatgggggcaagtgtgtggacctggtc
aacaagtacatctgccagtgtcagcatggtacctcaggtaccaactgtgagattaacttt
gatgactgcgccagcaaaccatgtgactatggcatctgcaaggacggcatcaaccgctac
gactgcgtgtgcaaaccaggcttcaccggccctctgtgcaacgtggagatggacgagtgc
tcgtccggaccctgccggaacggggggacgtgtgtggacgaggagaacggcttccactgc
cagtgtcccgagggcttccagcctccctactgtttctcccaggtggacgagtgtggcagc
aacccctgtgtgcacggcgcctgcagagatgacatcaacggctaccgctgtgactgtgag
cccggctgggtggggaagaactgtgacctagatcgtaatgactgtctgcccagcccctgt
cagaacgctggcacctgcattgatcagctgaacggattcacctgcaagtgtcgccagggc
ttcagaggtaacctgtgccaggtaaacatcaacgaatgttcgtccagtccgtgtctgaac
cagggcacgtgtgtggacggcgtggccagtttcacctgtctgtgtgagctgccctacagc
gggcccacctgtgccgacgtgctcaccccctgctcccccaacccctgcgccaaccatgcc
ctgtgcaccaacacacctgactacctgggctaccagtgcaactgccagcaaggatggcaa
ggtcagctgtgcaacattgacgtgaacgagtgcatcgccaacccgtgtaagaaccgtggt
acctgcaccaacacactgggagggtttgtgtgctcctgccgcggcggcttcaccggaccc
aactgtgagacggacatcaatgactgtgcccctaacccgtgtctgagtgggggttcctgt
acggacggtgtgaactcgttccgctgcagctgtctgccaggcttcacggggcctcgctgt
gccgtggaggtgaacgagtgtcagagcgccccctgtaagaacggaggcacctgcacagac
tacgtcaacagctacacctgcacctgcagacctggcttcactggcattaactgtgagacc
aacatcccagactgcactgaaagctcatgcttcaacggaggtacctgtacagacaagatc
aacggctactcctgtacctgtcgctcaggcttcacaggctcccactgccagtatgaggtg
aatgagtgtgactcccagccctgcctcaacggaggggtctgccaggacgctctggagtcc
ttccgctgctcctgccccaagggatacacaggcaaccgctgccagatgccagtggactgg
tgcagacgctcgtctccctgtcagaacggagggcgctgtcgtcagaaggacgcctccttc
tcctgtgagtgtctgggaggctggtctggacgctactgtgacatccctggggtttcctgt
gaggttgccgcgctcaagagaggcctccagacagacgagctgtgtcatcacggaggtcac
tgtgtcaacacaggcaacacccactactgtaagtgtcccacagactacacagacagctac
tgtgagagccaggtggaccactgtgaggacaaacactgtcgcaacggcgccacctgcagg
ggctacgtgggaggataccagtgtgactgtatgccgggctacaccggagagaactgtgag
atggaggtcaacgagtgccagtctcacccgtgtcagaacggtggcacctgcattgacctg
gtgggacactacatctgctcctgcccacctggcaccttgggtgttctgtgtgagatcaac
gaggatgactgtgctcctcctctgaggctgcgcgggactcctcctaagtgtctgaacaac
ggtacctgtgtggacagggtggggggctaccgctgtaactgtccccctggcttcactgga
gagaggtgtgagggggacatcaacgagtgtcactccaacccctgcagccccgccaacagt
ctggactgcatccagctccccaacgactaccagtgtgtctgcaagcccggcttcacaggt
cggcggtgccagagcaggttcagtgtgtgcgagtctcagccctgtcagaacggaggggcc
tgttctgtctccagcagctcagcccttggatacgcctgtacctgtcagctgggctatgct
gggaacaactgtgagaggaggatgacgtgtcgggagttgtcttgctataatggaggtagt
tgtgctctgaccacgcggggcgcccgctgtacctgcctgacaggctacgccgggccccag
tgccagcaccgtagtaacgagggctgctcctcccagccgtgccgcaacggaggcctctgc
accgaggagaccagcttccccttcttcctctgccagtgtgcccaaggctggacgggcaag
cgctgcgagcagggcagcaccaggctggtagagacccttccgccgcccgcctgcaccctg
gccgactgccacggcaaggccaacgacggtgtctgcgacaaggagtgcaacacattcccc
tgccgctgggacgggggcgactgctcgctggcggtgaacccgtgggcgcgctgcaccgac
ccgcgctgctggcgtgtcttcaacaacagccagtgtgacgagtcgtgcaacaacgccgac
tgcctctacgacaactttgactgcaagaacaaggagaaaatctgcaatcccatctacgag
gcgtactgcatcgaccactacgctgacggccgctgtgaccagggctgtaactcagaggag
tgtggctgggacggtctggactgtgcagggaaggttccagagaacctggctgacggggtg
ctggtcctggtggtcctgctacccccggacgaactcgtgaatacggcccctgccttcctg
cagaagctcagcgccatcctgagaaccaccctgcgcttccacctggaccacaacggagag
cccatgatccatccgtacaccggcaaagaggcgcgcatcaaacgagagctgcagccccac
caggaggtcattgggtccatagtgtacctggagatagacaaccgtctgtgttcccagcgg
tctgacgactgtttcccgtcggcagacagcgcagcagactacctgggagccctgtcagcc
gtggagatgctccacttcccctaccccatcaaagaagtccgcggtgagaagatgcaaggc
cctgtagacatgccagagtggggcaagctgatgctggtgggcatggcagccctgttccta
ttggtcatcctggtggtgggcgtgctgattggccgcaggaagagagaacacagcaccctg
tggttccccgagggcttcttccccaagaaggaacccagcagcaacaagaaccgcagggaa
cccttaggccaggatgcactgggcatgaaatacatgcccaagacggtggaggagtctctg
cttggtgaccacagtgactcgtggatcgacacagactgccccgaggccaagagactgaag
gttgaggagcccagcatcctgtcagacagtgaagacactgtagactgtagacagtggacc
cagcaccacctagcggctgcagacatccgcatgcccccctccatggccctcaccccgccc
cagggagagttcgaccaggactgcatggacgtcaacgtccgaggacctgacggtttcacc
cctctgatgctggcgtcgttctgcggaggcggtctggagcccgagctccccgaggaggag
gagtcagaggagtgttctgccaacatcatctctgacctcatctaccagggcgccacattg
gccgcccagacggaccgcaccggagagaccgcccttcacctggctgcccgctacgcccgc
gctgacgccgccaagcggctgttggacgccggggccgacgccaacgcgcaggacaacaca
gggcgcacgccgctacacgccgccgtggctgccgatgcccagggggtcttccagattctg
atccgtacccgagctacagacctggactctcgtatgtacgacggctccaccgccctgatc
ctggctgcccgcctggccgtagagggcatggtggaggaacttatcacctgccacgcagac
atcaactctgtcgacgaattgggtaaatctgctctgcactgggcagctgctgtcaacaac
gtggaggccaccatggccctgctgaagcacggagccaacaaagacatgcaggacctcaag
gaggagacgcctctcttcctggcggcgcgtgagggtagttgtgaggcggtcaaggtcctc
ctggcccactttgccaacagggagataactgaccatatggaccgtctgccacgggacatc
gcccaggagagaatgcaccatgacatcgttcagctgctggatgagtacaacacagtgagg
agcccccagggccacggaggggccccacaccacctggccgggggacacaccctgtccccc
ctcatgtgcccccccagcgccttcatgcccggcctgaagaacaccccccaggggaagaag
agtcgccgccccggggcaaagggttcaggtctgggagggcagcatgcccagaacctcaag
gattcagctaaggcccgcaacaagaagctgaccctggacatgcagagcgccctgctggag
agctctgtcaccctgtcgcccgtcgactccctggactccccccgcggaggggccaacaac
gccggctacatcaccaacccctgctccccggtcgccatgccttcctcggggctcttccac
tccatgtcggtgcccagcactcccatggtgcacagcagcatgatggacggctctggcccc
ttcgctgtgtctctggcccagctcaacgacctgggagatggaggcatgtccatgcagggc
cgcgtgtccatggccagccaggtcaaccagggcccccacggctacgtgctcaacgccggc
cagctggggctcaacatgggcctggtgagccctgtcagcgtgcccttcgactggcacagc
cgcatgccctcctcctcccagtgcgggggacaggtggtgaacctggtccacagcagccag
gcgggcatgcaccctcagagccccatgcagcagcagcagaacagcctcatgatgcagcag
caccagcagcaccagcagcaccagcagaacctgtaccgcagcgcccagcaggccatgctg
cagcccacgcctgtcatcgccagcacgcccatctccctcagccccgtcaagctaccctcc
atcgcagagcagcagctccacaaccactccatggccagccagcagagcctccgcatgggc
acctcctccccacccaccccccagacgacacagccccctccagccttcttccagcagcag
cagcctcctcagccccagccagcccctcagcccacctctccacaggcctcccaggcccct
cctccccaggccagtggcagcactgcaggcttggaggactaccccaccccgccctcccag
cacagctacacctccaccatggatgccacccccaagcattacctccgcctgtccagcgag
catccctacctgaccccctccccagagtcgcccgagccctggtccagcccctccccccac
tgtgtgtctgattggtcagactccacccccagcccggcagtggccggtcctgcccaaacg
cagatcccccatgtccaggagtccaacggcaagatgcaggtatttgcatga
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integrated database retrieval system
