Salvelinus namaycush (lake trout): 120037503
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Entry
120037503 CDS
T07522
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snh03016
]
120037503
03036 Chromosome and associated proteins [BR:
snh03036
]
120037503
Enzymes [BR:
snh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
120037503
Transfer RNA biogenesis [BR:
snh03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120037503
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
120037503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Motif
Other DBs
NCBI-GeneID:
120037503
NCBI-ProteinID:
XP_038839461
UniProt:
A0A8U0U5C8
LinkDB
All DBs
Position
Unknown
AA seq
1727 aa
AA seq
DB search
MSSILINALLSSCHDPDTLFNTLCWPTDSWPDTERVEALTTFIDGIGKLPQSDTSDDGDK
VAFSTAKRDIFLRKVESIIWTQCLPVLLKVSNGNGACKGKRVQDGRAEITIAVCRLLSVC
INTLCDTAVSGRVARAVLPSFQRPDGETEEELPGQGEGRLGIDVAIEAMSVILPTLSSNE
ELTTSILSSALSCIKTLSDALVSKITVRLIFTLLNCYSEDGIASKLQFILEDLCSWHKSD
SSNTDSPVVTERTLLCLTTLSDYLFSPAKLQQHTLPQSLSYTRPDPRRSLQFWRILQDGL
THKDNVSRKRALYLLKRCVALSEDEAVDFPSSSVSSEVNEEIIFRWAPDRCKLLREFWED
YALVMETLEENQIHVVRPVLNRIHTLIQTAANDSQGVSLFHPSWLLGVYQRMFHSENKSV
MREGVDHLLELQVLRRPAFALAFSQFIVGPFMDVMSESSLFHRTAGQSVGECPELGGKLQ
VFMVTFFSSLPQENRGPVLLQLVQRLGSQHWCAVPILFLSRALSHLPPCPLLGPDGLQAL
REVLRCTMITHQVLLRGAAQCFLLNTALSLTHVTSVTLDDVFSLLLHFRADESLRRGTSL
WNQVLCGGGMRNTTLESGTVWGWNEGTPLWNQVLCGGGMRNITLESGTVWGWNEEHHSGI
RYCVGVELCDWLADSEGSFRPCVREPADGTSTSTSPERETVRGYVQHQMEFFLRVPASSD
QTDSVPDPGEAELLAKAILLCVDIEWRTQRRSGGEETTGVSGGMDSLLRPLLDTLSRLHT
NVYLPLRKTDKSLQLLLRLLQLTPARHTPAAVEKEQEDSVTVSMETLVLGVVEPIQEFIL
RRLSGELQELCDVERAELYLSVLKEVVLMYSVLEWNHSKVQEAYFPRLLRYVLRTLEADQ
IPSVAGQVSRAVAMASLAMTCEVAVLGVFNLQSETTILLVHLSSYFYSPAPPPAPPLSLV
NFNQRLLKPPTADPSTGVSEQGPLLKDWGRVAAHFIRDQWTCLGYGRRIGPPGPLELPRA
SGSLQAAIEALSLLPSGLVLPVLDFMASMLPQVALSEEALCVEAVTVSWKLVLGLSSNPH
DFWPTLQGFVTMAFHHSLLELTEEQAPGLTATLQQIAVELMELSQAKTGVFNVLIQHCCH
TWLPSDPGSDGESQSDAMFSSALLHLDILAEACVYGPVFRRDQRLIQEVQVYVERLGEEC
AANTAVPSDNRDDQFPRVCVVAFLSRLQPSNQLHERLMEELVLRLLKKDEAISKSKQRYY
SNSLQHRVKNRVWQTLLMLLPKLRGEFVGTVLGRVFEAGFVSNQASVKYLIEWEMVLILV
QYPEHIDRLWTCFSVDQEKTKTSVCTFLSVLVHLNIIMPQLKEKAVQWRKALDVILQWCF
SHNFSVRLYALLALKRVWSLEGARAEAEEGAGGEDGLGGLATVVKACLHQAEAMQSTGNA
NKNWTRIQDHFFFGVFHPVRDYSVETIFYTFPSLSEVFEDEWIPPWKFEKLVDFSQNASL
PLRNPVPDLSQIQPGDWIQQDKGDQDGEERWAEVQKKMTPWRLGIQEQEPELGLVPQQRA
ARLGKLHSALLVVASLIDKPTNLGGLCRTCEIFGASGLVLDSLRHVSDKHFQALSVSSEL
WLPLLEVKPVELADFLQLKKREGYCIVGVEQTANSQSLKDYRFPEKTLLLLGNEREGIPA
NLLQLLDVCVEIPQQGVIRSLNVHVSAALLVWEYTCQYLSSTGGKSD
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctattttaatcaatgcccttttatcaagttgccatgatccggatactttgttt
aacacgttgtgctggccaactgactcgtggccggacacagaaagagtagaggcactgaca
acgtttattgacggaattggtaaactaccccagtctgacacatctgacgatggcgacaaa
gttgcattttctactgcaaaaagagacatctttctccgaaaagttgaatcgatcatttgg
acacaatgtttaccagttctcttgaaagtctctaacggaaacggggcatgcaaaggtaaa
cgtgtgcaagatggaagggctgaaatcaccatcgctgtgtgcaggcttctttctgtctgc
atcaacacactgtgtgacacggcagtttcggggcgagtcgcccgcgctgtcctgccatcc
ttccagcggccagacggggagacggaggaagagcttcccggacagggtgaggggcggctg
ggtatcgacgtggctatcgaagccatgtcagtcatcctacccactctctcatccaacgaa
gaattgaccacgtcgatcctctcatctgccctgtcctgtatcaagacgttatcggatgct
ctggtctccaaaatcaccgttcggcttattttcactctcctcaactgctacagcgaggat
gggatagcgagtaaactccagttcattttagaggatttgtgtagctggcacaagagtgac
agctcaaacacggactcgcctgtggtgacagaacgcactttgctgtgtttaacaactctc
tcggactatctcttctctccggctaaactacagcaacacacccttcctcaaagtctgagc
tatactcgaccagaccctcgtcgttctctgcagttctggaggattctacaagatggactg
acgcacaaagacaacgtgtcccggaagcgggcgttgtacctgctgaaaaggtgtgtcgct
ctgtcagaggatgaggcggttgactttccaagcagttcagtgtcaagtgaagttaatgag
gagatcatattcagatgggccccagacagatgcaagctgctcagagagttctgggaggac
tatgccttggttatggagacactggaggagaaccagattcatgtggtccgccctgtgctc
aacagaatccatacgttgatccaaacagcagcgaatgatagtcaaggcgtcagtctgttc
cacccgtcatggctgctgggtgtgtaccagcgtatgttccacagtgagaacaagtccgtc
atgagagagggagtggatcacctgctggaactccaggtgctccgacgtcctgccttcgcc
ctggccttctcacagttcattgtgggtccttttatggatgtgatgtctgaaagctccctc
tttcacaggactgcaggacagagtgtaggagagtgtcctgagctgggaggcaagctgcag
gtcttcatggtcacgttcttcagcagcctgccacaggagaacagaggtcctgtgttgctg
cagcttgtccagcggctaggttctcaacactggtgtgctgtccccatcctcttcctctct
cgggccctgtcccaccttcctccctgccccctcctgggccctgacggcctgcaagctctc
agggaggtgctgcgctgcactatgatcacccaccaggtgctactgagaggagctgcccag
tgtttcctgctcaacactgccctctccctgacacatgtgacctcagtgacgttggatgat
gtgtttagtttgctgctgcatttcagagcagacgagtctctacgtagaggaacatcactc
tggaatcaggtactgtgtgggggtggaatgaggaacaccactctggaatcaggtactgtg
tgggggtggaatgaaggaacaccactctggaatcaggtactgtgtgggggtggaatgagg
aacatcactctggaatcaggtactgtgtgggggtggaatgaggaacaccactctggaatc
aggtactgtgtgggggtggaactgtgtgactggctggctgacagtgaaggcagcttcagg
ccctgtgtcagagaaccagctgatggtaccagtaccagtacttctccagagagagagact
gtgagaggctacgtccaacaccagatggagttcttcctcagagtcccggctagctcagac
cagacagacagtgtcccagacccaggagaggcggagctgctagccaaggccatcctactg
tgtgttgacatagagtggaggactcagaggaggtctggaggagaggagactactggtgtc
agcggtgggatggactcgctcttacgccccctactggacacactgagcaggctccacact
aatgtctacctgccgctacgcaagactgacaagagcctgcagctgctgctacgattactg
cagctcacaccagccagacacacccctgctgcagtagagaaagaacaagaggacagtgtg
acggtctccatggagacgctggttctgggcgtggtggagcccattcaggagttcatcctc
cgaagactaagtggagaactacaggagctatgtgatgtagagcgtgctgagctctacctg
tcagtgctgaaggaggtggtgctgatgtacagtgtgttagagtggaaccactccaaggta
caggaggcctatttccccagactcctcagatacgtcctgaggaccctagaagctgaccag
atcccctctgtggcgggtcaggtatccagggcggttgccatggcgtcgttggccatgacc
tgtgaggttgcagtgctgggagtgttcaacctccaatcagagaccacgattctactggtc
catctgtctagctacttctactcccctgctccacccccagcccctcctctctctctggtc
aacttcaaccagcgcctgctgaaacctccaactgcagatccgtcaacaggtgtttcggag
cagggtcctctcctcaaggactggggccgtgtggcagctcatttcatccgggaccagtgg
acgtgcctgggctacgggaggagaataggcccacccgggcccctggagctccccagggca
tcggggtccctccaggctgctatagaggctctgtctctgctacccagtgggctggtactg
cctgtactggacttcatggcctcaatgttgccacaggtggcgctgtctgaggaggccctg
tgtgtagaggctgtgactgtctcctggaagctggtgctgggactgagcagtaaccctcat
gacttctggcccaccctgcagggctttgtgaccatggcctttcaccacagcctgctggag
ttaacagaggagcaggcacctgggctcactgctactctacaacagatagccgttgagttg
atggaactctcccaggccaagaccggtgtattcaacgttctgatccaacactgctgccac
acctggctgccctctgacccaggaagtgacggcgagagccaatcagatgccatgttctcc
agtgccctactgcaccttgacatcctggctgaggcatgtgtgtatggacctgtgttcagg
agggaccaaaggctgatccaggaggtccaggtctatgtggagaggcttggagaggagtgt
gctgctaacactgcagtccccagtgataaccgggatgaccagttcccacgtgtgtgtgtc
gtggcgttcctcagccgcctccagccctctaatcagctgcatgagagactgatggaagaa
ctggttctccgcttgctgaaaaaggatgaggccatatcgaagtcaaaacagcgttactat
agcaactccctgcagcatcgtgtcaagaacagggtgtggcagacactactgatgctgctg
cccaaactgagaggggagtttgtaggtaccgttctgggtcgtgtgtttgaggcaggtttc
gtcagtaaccaggcctcagtcaagtacctgatagagtgggagatggttctaatcctagtc
cagtatcctgaacacatagaccgtctctggacctgcttcagtgtggatcaagagaagacc
aagaccagtgtctgtaccttcctgtctgtgttggtccacctcaacatcatcatgcctcaa
ctcaaggagaaggcggtacagtggcgtaaggccctggatgttattctccagtggtgtttc
agccataacttcagtgtccgtctgtacgccctgctggccctgaagagggtgtggagtctg
gagggggcgagggccgaggccgaggagggggccgggggggaggatgggctcggggggctg
gccaccgtcgttaaggcctgtctgcaccaggctgaggctatgcagagtactggaaatgcc
aataagaactggaccaggattcaggaccacttcttctttggtgtctttcatcctgttaga
gactatagtgtggaaaccatattctacacattccccagcctatcagaggtgtttgaggac
gagtggattccgccctggaagtttgagaagttggtggacttctcccagaatgcatctctc
ccgttgaggaaccctgtccctgacctgagccagattcagcctggagactggatccagcag
gataaaggggatcaggatggtgaggagcgctgggccgaggtccagaagaagatgaccccc
tggaggttggggatccaggaacaggagccagagctgggtctggtgccccagcagagagca
gcacgcctgggcaagctgcacagtgccctcctggtggttgcctcgctcatagacaagccc
accaacctgggaggtctgtgtaggacgtgtgagatctttggggccagtggtctggtgttg
gacagtcttcgccacgtcagtgataaacacttccaggccctgagtgtctcctctgagcta
tggctccccctactggaggtgaagcccgtagaactagctgacttcctgcagctgaagaag
agggagggctactgcattgtgggagtggagcagacagccaatagtcagagtctaaaggac
tataggttccctgagaagactctgttactgctgggtaatgagcgtgaaggtatcccagct
aacctgctccagctgttggacgtgtgtgtggagatccctcagcaaggtgtcatccgttcc
ctcaacgtacacgtgagcgccgccctgctggtttgggagtacacctgccagtacctgtcc
tctactggagggaagtcagactga
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integrated database retrieval system
