Salvelinus namaycush (lake trout): 120037518
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Entry
120037518 CDS
T07522
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3-like
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120037518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120037518
Spliceosome [BR:
snh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
120037518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
TPX2
DUF4011
Motif
Other DBs
NCBI-GeneID:
120037518
NCBI-ProteinID:
XP_038839478
UniProt:
A0A8U0U4K8
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTTDQLRPFLDESAG
GFVERLFEALEESRNSRGNKGAGERNRKRDLKDVFGDEVEVGARRDVPEAGDGVPVKRKR
VPRFEEVEEPEVLPAPPTESPGMLTKIQIKQMMEAATRQIEERKKQLSFVPVSSQQRLPL
PTPQPDPPFASRLLPALSAPSSGSAQSIAPSQAATFMNDAIEKARKAAELQARIQSQLAM
KPGILGAIGNTGGPHNLVALANLHAMGIAPPKVAEARESNKPAPLILDDMGRTVDASGNE
VELTHRMPTLKANIRAVKREQFRQQLKEKPGEELESTIYFDGRVNIAPAQRAKKGFKFHE
QGRFEKIAQRIRTKAQLEKLQTEIAQAAKKTGIQASTKLALFAPKKMLGDGQVPIIEWWD
SYILPSNIDLSTDTNFVAMELFGVTNLVEHPAQISPPVDTDKPGVTLGVYLTKKEQKKLR
RQTRREGQKELQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQK
AHEEANAARKLTTEQRKEKKVKKLKEDLSLGVHISVYRIRNLHNPAKKFKVEANANQLYL
TGTVVLHRDVNMVVVEGGPKAQKKFKRLMLSRIKWEEHNSKRDDPDADDETKKNNRCSLV
WEGTAKERNYGEIKFKQCPTENMAREHFKKHGTEHYWDLALSQSVLESTDD
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcctaaacgggaggtggaggagctgcggccctgggtggaacggaccgtgaag
aaggtgctgggtttctctgagcctacagtcgtcactgcggccctgcactgtgtaggcaag
ggcctggacaagaggaagaccacagaccagctgcgtccattcctggatgagtctgccggt
gggttcgtggagagactatttgaggccctggaggagagccgcaattcccgtgggaacaag
ggtgctggggagaggaaccgcaagagagacctgaaggatgtctttggtgatgaggtggaa
gtgggtgcgaggcgggacgtccctgaggcaggagatggtgtgccggtgaagaggaaacgt
gtcccccgcttcgaggaggtggaggaaccagaggtcctacctgcaccccctactgagagc
cctggcatgctcactaagatacagatcaaacagatgatggaggctgccaccagacagata
gaggagaggaagaaacagctgagcttcgtcccagtgtcttcccagcagaggctgcccctg
cccactccccagccagaccctccctttgcctctcgtcttctccctgctctctctgcccct
tcctcgggctcggcccagtccatcgctccctcccaggcagctactttcatgaacgatgcc
atcgagaaggctaggaaggctgccgagctgcaggcccgcatccagtcgcagttagccatg
aagcctggtatactgggagccattgggaacactggaggacctcataacctggtggcgctg
gccaacctacacgccatggggatagcaccaccgaaggtggcggaggcccgtgagtcaaac
aagccggcccctctgattctggatgatatgggtcggaccgtggatgccagcggcaacgag
gtggagctaacacaccgcatgcccacgctcaaagctaatatccgtgcggtgaagagggag
cagttccgtcagcagttgaaggagaagcctggcgaggaactggagtccactatctacttt
gacgggcgtgttaacatagcacccgcccagcgagccaagaagggcttcaagttccacgag
cagggacgctttgagaagattgcccagaggatcagaactaaggcccagttggagaagctg
cagacagagatcgcccaggcagccaagaagacggggatccaggcctccaccaagctggcc
ctctttgcccccaagaagatgctgggggacgggcaggtgcccatcattgagtggtgggac
tcgtacatcctcccctccaacattgacctatccacagataccaattttgtggcgatggag
ttgtttggagtcacaaacctggtggagcaccctgctcagatcagcccccccgtggacaca
gacaagccaggagtgactctgggagtgtacctgactaagaaggaacagaagaagctgagg
agacagactcgcagggagggacagaaagagctacaggagaaggtccgactggggctcatg
ccccccccagaacctaaagtgcgcatctctaacctgatgagagtgctgggtacggaggca
gtacaggatcccactaaggtagaggcccacgtcagagcacagatggccaagagacagaag
gcccatgaggaggccaatgcagcccggaagctcacaaccgagcagagaaaagagaagaag
gtgaagaagctgaaagaggacctgagtcttggagttcacatctcagtctataggatccgt
aacctccacaacccggctaagaagtttaaggtggaagctaacgccaaccagctgtacctg
acgggcaccgtggtgctacaccgagacgtcaacatggtggtggtggagggaggtcccaaa
gcccagaagaagttcaagaggctcatgttgagcagaatcaaatgggaagaacacaactcc
aagagagatgatccagatgcagacgatgagaccaagaagaacaacagatgcagcctggtc
tgggagggcacggctaaggagcgtaactacggggagattaagtttaagcagtgtcctaca
gagaacatggctagagaacactttaagaagcacggaacagaacactactgggacctggct
ctgagccagagcgtgctggagagcactgatgactga
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